RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1126198", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1126198 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27891397 27891397 PRJNA1126198_P_NODE_311945_length_263_cov_1.363158_g311224_i0 PRJNA1126198 311945 263 1.363158 3.58510554 Minisyncoccota bacterium 2053589 Bacteria Bacteria 67.4 1.41e-11   NR MFA6919806.1 2053589 g311224 i0 46.8 0.878326996197719 77 40 86.7 1 31 258 23 99 MFA6919806.1 nucleoside 2-deoxyribosyltransferase domain-containing protein [Candidatus Paceibacterota bacterium] diamond 231 67.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32851357 32851357 PRJNA1126198_P_NODE_379200_length_251_cov_0.870787_g378479_i0 PRJNA1126198 379200 251 0.870787 2.18567537 Minisyncoccota bacterium 2053589 Bacteria Bacteria 94.4 1.98e-20   NR MFA5840953.1 2053589 g378479 i0 80 2.85657370517928 60 8 71.7 1 1 180 392 447 MFA5840953.1 GIY-YIG nuclease family protein [Candidatus Paceibacterota bacterium] diamond 717 94.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;