RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1126198", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1126198 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29975466 29975466 PRJNA1126198_P_NODE_106991_length_337_cov_3.064394_g106272_i0 PRJNA1126198 106991 337 3.064394 10.32700778 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 67.8 1.57e-10   NR HEY2775974.1 2838779 g106272 i0 45.8 2.19881305637982 83 40 72.1 3 336 94 279 358 HEY2775974.1 hypothetical protein [Candidatus Binatia bacterium] diamond 741 67.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31366059 31366059 PRJNA1126198_P_NODE_4496_length_840_cov_4.007823_g3939_i0 PRJNA1126198 4496 840 4.007823 33.6657132 Candidatus Binatus sp. 2811406 Bacteria Bacteria 52.8 8.46e-4   NR HYR96151.1 2811406 g3939 i0 37.1 0.510714285714286 143 72 47.9 8 811 410 104 237 HYR96151.1 hypothetical protein [Candidatus Binatus sp.] diamond 429 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae Candidatus Binatus Candidatus Binatus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;