RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1126198", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1126198 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19407197 19407197 PRJNA1126198_P_NODE_263356_length_274_cov_3.084577_g262635_i0 PRJNA1126198 263356 274 3.084577 8.45174098 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 153 1.95e-44   NR MCX6574018.1 2052149 g262635 i0 78 3.98540145985401 91 20 99.6 0 2 274 124 214 MCX6574018.1 formate--tetrahydrofolate ligase [Candidatus Aminicenantes bacterium] diamond 1092 153 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
31144101 31144101 PRJNA1126198_P_NODE_460475_length_243_cov_0.905882_g459754_i0 PRJNA1126198 460475 243 0.905882 2.20129326 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 79.3 1.2e-15   NR MBD3415432.1 2052149 g459754 i0 49.3 0.925925925925926 75 38 92.6 0 242 18 188 262 MBD3415432.1 nucleoside triphosphate pyrophosphohydrolase [Candidatus Aminicenantes bacterium] diamond 225 79.3 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;