RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1126198", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 6 ✖

tax_clade 1

  • Apusozoa · 6 ✖

bioproject 1

  • PRJNA1126198 · 6 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4108818 4108818 PRJNA1126198_P_NODE_480364_length_235_cov_3.691358_g479643_i0 PRJNA1126198 480364 235 3.691358 8.6746913 Thecamonas trahens 529818 Root_unresolved Root_unresolved 75 4.49e-9   NTclustered gi|923122628|ref|XM_013899330.1| 461836 g479643 i0 90.909 0.582978723404255 55 5 23 0 178 232 2586 2532 Thecamonas trahens ATCC 50062 major vault protein (AMSG_09422), mRNA blastn 137 75 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
7934101 7934101 PRJNA1126198_P_NODE_149067_length_313_cov_2.650000_g148348_i0 PRJNA1126198 149067 313 2.65 8.2945 Thecamonas trahens 529818 Root_unresolved Root_unresolved 224 5.86e-54   NTclustered gi|923125359|ref|XM_013900694.1| 461836 g148348 i0 82.879 60.3610223642173 257 36 81 6 31 283 529 277 Thecamonas trahens ATCC 50062 calmodulin (AMSG_07687), mRNA blastn 18893 224 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
16858576 16858576 PRJNA1126198_P_NODE_2974_length_1059_cov_3.092292_g2522_i0 PRJNA1126198 2974 1059 3.092292 32.74737228 Thecamonas trahens 529818 Root_unresolved Root_unresolved 403 2.5799999999999988e-107   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g2522 i0 76.428 16.5495750708215 823 148 76 33 151 950 997 198 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 17526 403 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28996937 28996937 PRJNA1126198_P_NODE_398948_length_249_cov_0.875000_g398227_i0 PRJNA1126198 398948 249 0.875 2.17875 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 73.6 5.43e-13   NR XP_013757880.1 461836 g398227 i0 58.1 1.6144578313253 62 25 74.7 1 41 226 360 420 XP_013757880.1 uncharacterized protein AMSG_05471 [Thecamonas trahens ATCC 50062] diamond 402 73.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29249112 29249112 PRJNA1126198_P_NODE_90929_length_350_cov_1.108303_g90211_i0 PRJNA1126198 90929 350 1.108303 3.8790605 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 53.5 2.12e-5   NR XP_013762411.1 461836 g90211 i0 35.8 0.814285714285714 95 61 81.4 0 312 28 772 866 XP_013762411.1 uncharacterized protein AMSG_00680 [Thecamonas trahens ATCC 50062] diamond 285 53.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29344018 29344018 PRJNA1126198_P_NODE_263429_length_274_cov_2.741294_g262708_i0 PRJNA1126198 263429 274 2.741294 7.51114556 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 72.8 5.28e-14   NR XP_013759626.1 461836 g262708 i0 45.3 5.18978102189781 86 46 93.1 1 17 271 4 89 XP_013759626.1 prefoldin subunit 4 [Thecamonas trahens ATCC 50062] diamond 1422 72.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;