contig_metadata
51 rows where bioproject = "PRJNA1123686" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 280899 | 280899 | PRJNA1123686_S_NODE_13241_length_174_cov_9.158621_g13209_i0 | PRJNA1123686 | 13241 | 174 | 9.158621 | 15.93600054 | Gemella haemolysans | 1379 | Bacteria | Bacteria | 322 | 1.01e-83 | NTclustered | gi|1540173839|emb|LR134484.1| | 1379 | g13209 | i0 | 100 | 258.350574712644 | 174 | 0 | 100 | 0 | 1 | 174 | 11020 | 10847 | Gemella haemolysans strain NCTC10459 genome assembly, chromosome: 1 | blastn | 44953 | 322 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Gemellaceae | Gemella | Gemella haemolysans | ||
| 1030090 | 1030090 | PRJNA1123686_S_NODE_8981_length_195_cov_5.319277_g8949_i0 | PRJNA1123686 | 8981 | 195 | 5.319277 | 10.37259015 | Streptococcus | 1301 | Bacteria | Bacteria | 355 | 1.15e-93 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g8949 | i0 | 100 | 229.287179487179 | 192 | 0 | 98 | 0 | 1 | 192 | 1573198 | 1573389 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 44711 | 355 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 1555486 | 1555486 | PRJNA1123686_S_NODE_18062_length_159_cov_2.215385_g18030_i0 | PRJNA1123686 | 18062 | 159 | 2.215385 | 3.52246215 | Anaerococcus nagyae | 1755241 | Bacteria | Bacteria | 267 | 4.3199999999999996e-67 | NTclustered | gi|2722731751|dbj|AP031484.1| | 1755241 | g18030 | i0 | 96.855 | 38.9245283018868 | 159 | 5 | 100 | 0 | 1 | 159 | 123360 | 123518 | Anaerococcus nagyae NBRC 113824 DNA, complete genome: sequence1 | blastn | 6189 | 267 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus nagyae | ||
| 2305357 | 2305357 | PRJNA1123686_S_NODE_14302_length_170_cov_9.886525_g14270_i0 | PRJNA1123686 | 14302 | 170 | 9.886525 | 16.8070925 | Abiotrophia | 46123 | Bacteria | Bacteria | 309 | 7.64e-80 | NTclustered | gi|1848537030|gb|CP053988.1| | 46125 | g14270 | i0 | 99.412 | 413.5 | 170 | 1 | 100 | 0 | 1 | 170 | 863443 | 863612 | Abiotrophia defectiva strain FDAARGOS_785 chromosome, complete genome | blastn | 70295 | 309 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Aerococcaceae | Abiotrophia | Abiotrophia defectiva | ||
| 3580674 | 3580674 | PRJNA1123686_S_NODE_43_length_778_cov_320.267023_g3_i4 | PRJNA1123686 | 43 | 778 | 320.267023 | 2491.67743894 | root | 1 | Root_unresolved | Root_unresolved | 1319 | 0 | NTclustered | gi|2283119276|gb|CP071933.1| | 1390 | g3 | i4 | 97.416 | 134.028277634961 | 774 | 20 | 99 | 0 | 5 | 778 | 482 | 1255 | Bacillus amyloliquefaciens strain CAS02 plasmid unnamed, complete sequence | blastn | 104274 | 1327 | 0.9939713639789 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus amyloliquefaciens | ||
| 3580677 | 3580677 | PRJNA1123686_S_NODE_63_length_663_cov_11838.542587_g49_i0 | PRJNA1123686 | 63 | 663 | 11838.542587 | 78489.53735181 | root | 1 | Root_unresolved | Root_unresolved | 405 | 4.3999999999999995e-108 | NTclustered | gi|1373834433|emb|LT963441.1| | 1283 | g49 | i0 | 77.778 | 99.8476621417798 | 657 | 146 | 99 | 0 | 7 | 663 | 2422566 | 2421910 | Staphylococcus haemolyticus isolate Staphylococcus haemolyticus K8 genome assembly, chromosome: I | blastn | 66199 | 405 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus haemolyticus | ||
| 3580678 | 3580678 | PRJNA1123686_S_NODE_7943_length_202_cov_5.283237_g7911_i0 | PRJNA1123686 | 7943 | 202 | 5.283237 | 10.67213874 | Veillonella | 29465 | Bacteria | Bacteria | 374 | 3.3e-99 | NTclustered | gi|2672138803|gb|CP138632.1| | 29466 | g7911 | i0 | 100 | 518.306930693069 | 202 | 0 | 100 | 0 | 1 | 202 | 886433 | 886232 | Veillonella parvula strain PK1910 chromosome, complete genome | blastn | 104698 | 374 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella parvula | ||
| 4858062 | 4858062 | PRJNA1123686_S_NODE_10104_length_188_cov_13.220126_g10072_i0 | PRJNA1123686 | 10104 | 188 | 13.220126 | 24.85383688 | Bacillales | 1385 | Bacteria | Bacteria | 340 | 3.07e-89 | NTclustered | gi|2692800537|gb|CP146065.1| | 1283 | g10072 | i0 | 99.465 | 503.994680851064 | 187 | 1 | 99 | 0 | 2 | 188 | 771795 | 771981 | Staphylococcus haemolyticus strain SPS12 chromosome, complete genome | blastn | 94751 | 340 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus haemolyticus | ||
| 4858066 | 4858066 | PRJNA1123686_S_NODE_13244_length_174_cov_8.993103_g13212_i0 | PRJNA1123686 | 13244 | 174 | 8.993103 | 15.64799922 | Staphylococcus | 1279 | Bacteria | Bacteria | 320 | 3.63e-83 | NTclustered | gi|2482395019|gb|CP094927.1| | 1280 | g13212 | i0 | 100 | 549.48275862069 | 173 | 0 | 99 | 0 | 2 | 174 | 970058 | 969886 | Staphylococcus aureus strain 13 chromosome, complete genome | blastn | 95610 | 320 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 4858089 | 4858089 | PRJNA1123686_S_NODE_424_length_397_cov_8.288043_g394_i0 | PRJNA1123686 | 424 | 397 | 8.288043 | 32.90353071 | Streptococcus | 1301 | Bacteria | Bacteria | 551 | 3.069999999999999e-152 | NTclustered | gi|2246565702|gb|CP097843.1| | 1303 | g394 | i0 | 94.886 | 292.722921914358 | 352 | 18 | 89 | 0 | 20 | 371 | 17679 | 18030 | Streptococcus oralis strain HP01 chromosome, complete genome | blastn | 116211 | 551 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 4858093 | 4858093 | PRJNA1123686_S_NODE_8164_length_200_cov_8.690058_g8132_i0 | PRJNA1123686 | 8164 | 200 | 8.690058 | 17.380116 | Streptococcus | 1301 | Bacteria | Bacteria | 350 | 5.5e-92 | NTclustered | gi|1539702073|emb|LR134266.1| | 78535 | g8132 | i0 | 98.974 | 309.21 | 195 | 2 | 98 | 0 | 6 | 200 | 18953 | 18759 | Streptococcus viridans strain NCTC3166 genome assembly, chromosome: 1 | blastn | 61842 | 350 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus viridans | ||
| 5384058 | 5384058 | PRJNA1123686_S_NODE_4445_length_236_cov_12.676329_g4413_i0 | PRJNA1123686 | 4445 | 236 | 12.676329 | 29.91613644 | Gemella haemolysans | 1379 | Bacteria | Bacteria | 424 | 3.89e-114 | NTclustered | gi|1540173839|emb|LR134484.1| | 1379 | g4413 | i0 | 99.149 | 391.423728813559 | 235 | 2 | 99 | 0 | 1 | 235 | 9757 | 9523 | Gemella haemolysans strain NCTC10459 genome assembly, chromosome: 1 | blastn | 92376 | 424 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Gemellaceae | Gemella | Gemella haemolysans | ||
| 7407948 | 7407948 | PRJNA1123686_S_NODE_14226_length_170_cov_23.858156_g14194_i0 | PRJNA1123686 | 14226 | 170 | 23.858156 | 40.5588652 | Streptococcus | 1301 | Bacteria | Bacteria | 309 | 7.64e-80 | NTclustered | gi|1782758915|gb|CP018189.1| | 1304 | g14194 | i0 | 99.412 | 578.029411764706 | 170 | 1 | 100 | 0 | 1 | 170 | 17133 | 16964 | Streptococcus salivarius strain ICDC3 chromosome, complete genome | blastn | 98265 | 309 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus salivarius | ||
| 7933883 | 7933883 | PRJNA1123686_S_NODE_19907_length_154_cov_8.728000_g19875_i0 | PRJNA1123686 | 19907 | 154 | 8.728 | 13.44112 | Granulicatella elegans | 137732 | Bacteria | Bacteria | 274 | 2.48e-69 | NTclustered | gi|2127543886|gb|CP085953.1| | 137732 | g19875 | i0 | 98.701 | 252.805194805195 | 154 | 2 | 100 | 0 | 1 | 154 | 105801 | 105954 | Granulicatella elegans strain FDAARGOS_1559 chromosome, complete genome | blastn | 38932 | 274 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Granulicatella | Granulicatella elegans | ||
| 8683242 | 8683242 | PRJNA1123686_S_NODE_267_length_433_cov_1586.564356_g238_i0 | PRJNA1123686 | 267 | 433 | 1586.564356 | 6869.82366148 | root | 1 | Root_unresolved | Root_unresolved | 440 | 7.639999999999997e-119 | NTclustered | gi|1373834433|emb|LT963441.1| | 1283 | g238 | i0 | 84.988 | 100.302540415704 | 433 | 65 | 100 | 0 | 1 | 433 | 2421910 | 2422342 | Staphylococcus haemolyticus isolate Staphylococcus haemolyticus K8 genome assembly, chromosome: I | blastn | 43431 | 440 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus haemolyticus | ||
| 9208863 | 9208863 | PRJNA1123686_S_NODE_19468_length_155_cov_7.357143_g19436_i0 | PRJNA1123686 | 19468 | 155 | 7.357143 | 11.40357165 | Peptostreptococcus anaerobius | 1261 | Bacteria | Bacteria | 246 | 5.4499999999999994e-61 | NTclustered | gi|213536838|gb|FJ410395.1| | 1261 | g19436 | i0 | 95.455 | 920.438709677419 | 154 | 7 | 99 | 0 | 1 | 154 | 536 | 383 | Peptostreptococcus anaerobius ATCC:27337 16S-23S ribosomal intergenic spacer and 23S ribosomal RNA gene, partial sequence | blastn | 142668 | 246 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Peptostreptococcus | Peptostreptococcus anaerobius | ||
| 9958181 | 9958181 | PRJNA1123686_S_NODE_1048_length_330_cov_725.910299_g1016_i0 | PRJNA1123686 | 1048 | 330 | 725.910299 | 2395.5039867 | root | 1 | Root_unresolved | Root_unresolved | 333 | 9.909999999999998e-87 | NTclustered | gi|1373834433|emb|LT963441.1| | 1283 | g1016 | i0 | 84.848 | 100.075757575758 | 330 | 50 | 100 | 0 | 1 | 330 | 2422239 | 2421910 | Staphylococcus haemolyticus isolate Staphylococcus haemolyticus K8 genome assembly, chromosome: I | blastn | 33025 | 333 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus haemolyticus | ||
| 10484418 | 10484418 | PRJNA1123686_S_NODE_5609_length_223_cov_6.675258_g5577_i0 | PRJNA1123686 | 5609 | 223 | 6.675258 | 14.88582534 | Lachnoanaerobaculum gingivalis | 2490855 | Bacteria | Bacteria | 374 | 3.72e-99 | NTclustered | gi|2504688929|gb|CP124777.1| | 2490855 | g5577 | i0 | 96.861 | 323.681614349776 | 223 | 7 | 100 | 0 | 1 | 223 | 251979 | 251757 | Lachnoanaerobaculum gingivalis strain SHL-20230108WGSARO1-L360107582 chromosome, complete genome | blastn | 72181 | 374 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnoanaerobaculum | Lachnoanaerobaculum gingivalis | ||
| 11233457 | 11233457 | PRJNA1123686_S_NODE_1049_length_330_cov_378.225914_g1017_i0 | PRJNA1123686 | 1049 | 330 | 378.225914 | 1248.1455162 | root | 1 | Root_unresolved | Root_unresolved | 206 | 2.25e-48 | NTclustered | gi|1373834433|emb|LT963441.1| | 1283 | g1017 | i0 | 77.879 | 100.084848484848 | 330 | 73 | 100 | 0 | 1 | 330 | 2421910 | 2422239 | Staphylococcus haemolyticus isolate Staphylococcus haemolyticus K8 genome assembly, chromosome: I | blastn | 33028 | 206 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus haemolyticus | ||
| 11233465 | 11233465 | PRJNA1123686_S_NODE_13109_length_175_cov_2.582192_g13077_i0 | PRJNA1123686 | 13109 | 175 | 2.582192 | 4.518836 | Lactiplantibacillus | 2767842 | Bacteria | Bacteria | 324 | 2.83e-84 | NTclustered | gi|1611638273|gb|CP033616.1| | 1590 | g13077 | i0 | 100 | 480.028571428571 | 175 | 0 | 100 | 0 | 1 | 175 | 747438 | 747264 | Lactiplantibacillus plantarum strain J26 chromosome, complete genome | blastn | 84005 | 324 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Lactiplantibacillus plantarum | ||
| 11233473 | 11233473 | PRJNA1123686_S_NODE_20309_length_153_cov_13.895161_g20277_i0 | PRJNA1123686 | 20309 | 153 | 13.895161 | 21.25959633 | Streptococcus | 1301 | Bacteria | Bacteria | 283 | 4.0799999999999995e-72 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g20277 | i0 | 100 | 328.941176470588 | 153 | 0 | 100 | 0 | 1 | 153 | 1571439 | 1571591 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 50328 | 283 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 11233481 | 11233481 | PRJNA1123686_S_NODE_3469_length_251_cov_8.450450_g3437_i0 | PRJNA1123686 | 3469 | 251 | 8.45045 | 21.2106295 | Staphylococcus | 1279 | Bacteria | Bacteria | 412 | 9.06e-111 | NTclustered | gi|2669659999|gb|CP090011.1| | 1290 | g3437 | i0 | 99.127 | 421.705179282869 | 229 | 2 | 92 | 0 | 23 | 251 | 762371 | 762143 | Staphylococcus hominis strain acrlg chromosome, complete genome | blastn | 105848 | 412 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 11233490 | 11233490 | PRJNA1123686_S_NODE_8829_length_196_cov_4.497006_g8797_i0 | PRJNA1123686 | 8829 | 196 | 4.497006 | 8.81413176 | Gemella | 1378 | Bacteria | Bacteria | 250 | 5.6e-62 | NTclustered | gi|1540173839|emb|LR134484.1| | 1379 | g8797 | i0 | 95.513 | 528.785714285714 | 156 | 7 | 80 | 0 | 41 | 196 | 11047 | 11202 | Gemella haemolysans strain NCTC10459 genome assembly, chromosome: 1 | blastn | 103642 | 250 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Gemellaceae | Gemella | Gemella haemolysans | ||
| 15057748 | 15057748 | PRJNA1123686_S_NODE_1472_length_307_cov_15.402878_g1440_i0 | PRJNA1123686 | 1472 | 307 | 15.402878 | 47.28683546 | Staphylococcus | 1279 | Bacteria | Bacteria | 553 | 6.439999999999998e-153 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g1440 | i0 | 99.344 | 536.065146579805 | 305 | 2 | 99 | 0 | 1 | 305 | 748728 | 748424 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 164572 | 553 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 15057749 | 15057749 | PRJNA1123686_S_NODE_14752_length_169_cov_2.478571_g14720_i0 | PRJNA1123686 | 14752 | 169 | 2.478571 | 4.18878499 | Bacillus | 1386 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|1755782303|gb|CP032365.1| | 1890302 | g14720 | i0 | 97.059 | 0.402366863905325 | 34 | 0 | 20 | 1 | 78 | 111 | 3555079 | 3555111 | Bacillus wiedmannii strain SR52 chromosome, complete genome | blastn | 68 | 56.5 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus wiedmannii | ||
| 15057763 | 15057763 | PRJNA1123686_S_NODE_6292_length_216_cov_4.245989_g6260_i0 | PRJNA1123686 | 6292 | 216 | 4.245989 | 9.17133624 | Megamonas | 158846 | Bacteria | Bacteria | 399 | 5.909999999999999e-107 | NTclustered | gi|2104390565|gb|CP084018.1| | 437897 | g6260 | i0 | 100 | 444.861111111111 | 216 | 0 | 100 | 0 | 1 | 216 | 1090184 | 1090399 | Megamonas funiformis strain NBRC 114415 chromosome, complete genome | blastn | 96090 | 399 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Selenomonadales | Selenomonadaceae | Megamonas | Megamonas funiformis | ||
| 15583756 | 15583756 | PRJNA1123686_S_NODE_11653_length_181_cov_7.651316_g11621_i0 | PRJNA1123686 | 11653 | 181 | 7.651316 | 13.84888196 | Gemella haemolysans | 1379 | Bacteria | Bacteria | 311 | 2.3e-80 | NTclustered | gi|1540173839|emb|LR134484.1| | 1379 | g11621 | i0 | 97.778 | 155.906077348066 | 180 | 4 | 99 | 0 | 2 | 181 | 9776 | 9955 | Gemella haemolysans strain NCTC10459 genome assembly, chromosome: 1 | blastn | 28219 | 311 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Gemellaceae | Gemella | Gemella haemolysans | ||
| 18132602 | 18132602 | PRJNA1123686_S_NODE_13595_length_173_cov_4.013889_g13563_i0 | PRJNA1123686 | 13595 | 173 | 4.013889 | 6.94402797 | Solibacillus sp. FSL R5-0691 | 2921653 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|2709749795|gb|CP150231.1| | 2921653 | g13563 | i0 | 92.105 | 0.219653179190751 | 38 | 1 | 22 | 2 | 127 | 164 | 1307588 | 1307553 | Solibacillus sp. FSL R5-0691 chromosome, complete genome | blastn | 38 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Caryophanaceae | Solibacillus | Solibacillus sp. FSL R5-0691 | ||
| 18881624 | 18881624 | PRJNA1123686_S_NODE_115_length_549_cov_1011.430769_g95_i0 | PRJNA1123686 | 115 | 549 | 1011.430769 | 5552.75492181 | Veillonella | 29465 | Bacteria | Bacteria | 784 | 0 | NTclustered | gi|2573680218|gb|CP133463.1| | 29466 | g95 | i0 | 97.009 | 380.302367941712 | 468 | 11 | 85 | 2 | 2 | 468 | 1359070 | 1358605 | Veillonella parvula strain DSM 2007 chromosome, complete genome | blastn | 208786 | 784 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella parvula | ||
| 20156471 | 20156471 | PRJNA1123686_S_NODE_14856_length_168_cov_14.287770_g14824_i0 | PRJNA1123686 | 14856 | 168 | 14.28777 | 24.0034536 | Streptococcus | 1301 | Bacteria | Bacteria | 311 | 2.11e-80 | NTclustered | gi|1943211519|gb|CP065707.1| | 1303 | g14824 | i0 | 100 | 334.940476190476 | 168 | 0 | 100 | 0 | 1 | 168 | 424117 | 424284 | Streptococcus oralis strain FDAARGOS_885 chromosome, complete genome | blastn | 56270 | 311 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 20682345 | 20682345 | PRJNA1123686_S_NODE_14317_length_170_cov_8.723404_g14285_i0 | PRJNA1123686 | 14317 | 170 | 8.723404 | 14.8297868 | Anaerovoracaceae bacterium | 3030912 | Bacteria | Bacteria | 132 | 1.78e-26 | NTclustered | gi|2621784642|emb|OY781100.1| | 3030912 | g14285 | i0 | 81.437 | 28.6117647058824 | 167 | 25 | 96 | 6 | 1 | 164 | 3729492 | 3729655 | MAG: Anaerovoracaceae bacterium isolate d0a44124-bd0d-43a8-b654-cc1806fddd19 genome assembly, chromosome: 1 | blastn | 4864 | 132 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Anaerovoracaceae | Anaerovoracaceae bacterium | |||
| 20682366 | 20682366 | PRJNA1123686_S_NODE_19877_length_154_cov_10.384000_g19845_i0 | PRJNA1123686 | 19877 | 154 | 10.384 | 15.99136 | Granulicatella elegans | 137732 | Bacteria | Bacteria | 250 | 4.18e-62 | NTclustered | gi|2127543886|gb|CP085953.1| | 137732 | g19845 | i0 | 99.275 | 335.551948051948 | 138 | 1 | 90 | 0 | 3 | 140 | 105167 | 105304 | Granulicatella elegans strain FDAARGOS_1559 chromosome, complete genome | blastn | 51675 | 250 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Granulicatella | Granulicatella elegans | ||
| 21432037 | 21432037 | PRJNA1123686_S_NODE_657_length_364_cov_72.020896_g626_i0 | PRJNA1123686 | 657 | 364 | 72.020896 | 262.15606144 | Streptococcus | 1301 | Bacteria | Bacteria | 590 | 5.9199999999999985e-164 | NTclustered | gi|2179899321|gb|CP046523.1| | 1303 | g626 | i0 | 95.879 | 341.906593406593 | 364 | 15 | 100 | 0 | 1 | 364 | 17370 | 17007 | Streptococcus oralis strain SOD chromosome, complete genome | blastn | 124454 | 595 | 0.991596638655462 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 21957673 | 21957673 | PRJNA1123686_S_NODE_16198_length_164_cov_4.637037_g16166_i0 | PRJNA1123686 | 16198 | 164 | 4.637037 | 7.60474068 | Peptostreptococcus anaerobius | 1261 | Bacteria | Bacteria | 228 | 2.1199999999999996e-55 | NTclustered | gi|213536838|gb|FJ410395.1| | 1261 | g16166 | i0 | 91.975 | 1002.9512195122 | 162 | 13 | 99 | 0 | 3 | 164 | 566 | 727 | Peptostreptococcus anaerobius ATCC:27337 16S-23S ribosomal intergenic spacer and 23S ribosomal RNA gene, partial sequence | blastn | 164484 | 228 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Peptostreptococcus | Peptostreptococcus anaerobius | ||
| 21957710 | 21957710 | PRJNA1123686_S_NODE_758_length_354_cov_15.916923_g727_i0 | PRJNA1123686 | 758 | 354 | 15.916923 | 56.34590742 | Veillonella rogosae | 423477 | Bacteria | Bacteria | 442 | 1.6999999999999996e-119 | NTclustered | gi|2446175566|gb|CP117967.1| | 423477 | g727 | i0 | 89.235 | 328.087570621469 | 353 | 38 | 99 | 0 | 2 | 354 | 1850439 | 1850791 | Veillonella rogosae strain AC2811 AN NA 2 chromosome, complete genome | blastn | 116143 | 442 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella rogosae | ||
| 23233168 | 23233168 | PRJNA1123686_S_NODE_15479_length_166_cov_9.722628_g15447_i0 | PRJNA1123686 | 15479 | 166 | 9.722628 | 16.13956248 | Veillonella rodentium | 248315 | Bacteria | Bacteria | 211 | 2.17e-50 | NTclustered | gi|1231752167|emb|LT906470.1| | 248315 | g15447 | i0 | 89.759 | 224.048192771084 | 166 | 16 | 99 | 1 | 1 | 165 | 104980 | 104815 | Veillonella rodentium strain NCTC12018 genome assembly, chromosome: 1 | blastn | 37192 | 211 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella rodentium | ||
| 23982332 | 23982332 | PRJNA1123686_S_NODE_19259_length_156_cov_2.338583_g19227_i0 | PRJNA1123686 | 19259 | 156 | 2.338583 | 3.64818948 | Staphylococcus | 1279 | Bacteria | Bacteria | 287 | 3.24e-73 | NTclustered | gi|1700448853|gb|MK015782.1| | 28035 | g19227 | i0 | 100 | 479.153846153846 | 155 | 0 | 99 | 0 | 2 | 156 | 2422 | 2576 | Staphylococcus lugdunensis strain PL447 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 74748 | 287 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus lugdunensis | ||
| 24506812 | 24506812 | PRJNA1123686_S_NODE_140_length_523_cov_20.336032_g118_i1 | PRJNA1123686 | 140 | 523 | 20.336032 | 106.35744736 | uncultured Bacillus sp. | 83428 | Bacteria | Bacteria | 881 | 0 | NTclustered | gi|583826822|emb|HG917250.1| | 83428 | g118 | i1 | 97.137 | 561.630975143403 | 524 | 11 | 99 | 3 | 2 | 523 | 13 | 534 | Uncultured Bacillus sp. partial 16S rRNA gene, clone M168 | blastn | 293733 | 881 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | uncultured Bacillus sp. | ||
| 27006839 | 27006839 | PRJNA1123686_S_NODE_8122_length_200_cov_20.111111_g8090_i0 | PRJNA1123686 | 8122 | 200 | 20.111111 | 40.222222 | Lactiplantibacillus plantarum | 1590 | Bacteria | Bacteria | 40.4 | 0.0347 | NR | WP_252130203.1 | 1590 | g8090 | i0 | 58.6 | 0.435 | 29 | 12 | 43.5 | 0 | 104 | 190 | 1 | 29 | WP_252130203.1 hypothetical protein, partial [Lactiplantibacillus plantarum] | diamond | 87 | 40.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Lactiplantibacillus plantarum | ||
| 27943898 | 27943898 | PRJNA1123686_S_NODE_6505_length_213_cov_48.788043_g6473_i0 | PRJNA1123686 | 6505 | 213 | 48.788043 | 103.91853159 | root | 1 | Root_unresolved | Root_unresolved | 59.3 | 2.4e-9 | NR | WP_252130084.1 | 1590 | g6473 | i0 | 81.8 | 27.0422535211268 | 33 | 6 | 46.5 | 0 | 212 | 114 | 65 | 97 | WP_252130084.1 hypothetical protein, partial [Lactiplantibacillus plantarum] | diamond | 5760 | 59.7 | 0.993299832495812 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Lactiplantibacillus plantarum | ||
| 29690899 | 29690899 | PRJNA1123686_S_NODE_18590_length_157_cov_15.546875_g18558_i0 | PRJNA1123686 | 18590 | 157 | 15.546875 | 24.40859375 | Staphylococcus aureus | 1280 | Bacteria | Bacteria | 87 | 3.9800000000000006e-21 | NR | QHG77600.1 | 1280 | g18558 | i0 | 76.9 | 3.89808917197452 | 52 | 12 | 99.4 | 0 | 2 | 157 | 8 | 59 | QHG77600.1 hypothetical protein EAX85_13930 [Staphylococcus aureus] | diamond | 612 | 87 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 30038652 | 30038652 | PRJNA1123686_S_NODE_19651_length_155_cov_2.293651_g19619_i0 | PRJNA1123686 | 19651 | 155 | 2.293651 | 3.55515905 | Galactobacillus timonensis | 2041840 | Bacteria | Bacteria | 48.9 | 7.44e-5 | NR | WP_277018500.1 | 2041840 | g19619 | i0 | 100 | 0.406451612903226 | 21 | 0 | 40.6 | 0 | 1 | 63 | 562 | 582 | WP_277018500.1 ABC transporter ATP-binding protein [Galactobacillus timonensis] | diamond | 63 | 48.9 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Galactobacillus | Galactobacillus timonensis | ||
| 30164833 | 30164833 | PRJNA1123686_S_NODE_7752_length_203_cov_13.218391_g7720_i0 | PRJNA1123686 | 7752 | 203 | 13.218391 | 26.83333373 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 42.4 | 0.0304 | NR | MBQ2991229.1 | 2044939 | g7720 | i0 | 42.6 | 0.694581280788177 | 47 | 27 | 69.5 | 0 | 7 | 147 | 252 | 298 | MBQ2991229.1 cadmium-translocating P-type ATPase [Clostridia bacterium] | diamond | 141 | 42.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 30291843 | 30291843 | PRJNA1123686_S_NODE_7612_length_204_cov_16.325714_g7580_i0 | PRJNA1123686 | 7612 | 204 | 16.325714 | 33.30445656 | Exiguobacterium aurantiacum | 33987 | Bacteria | Bacteria | 49.7 | 5.13e-6 | NR | WP_233005565.1 | 33987 | g7580 | i0 | 51.6 | 0.941176470588235 | 64 | 30 | 92.6 | 1 | 204 | 16 | 1 | 64 | WP_233005565.1 hypothetical protein, partial [Exiguobacterium aurantiacum] | diamond | 192 | 49.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium aurantiacum | |||
| 30638847 | 30638847 | PRJNA1123686_S_NODE_8753_length_196_cov_12.700599_g8721_i0 | PRJNA1123686 | 8753 | 196 | 12.700599 | 24.89317404 | Clostridium sp. CAG:44 | 1506 | Bacteria | Bacteria | 42.4 | 0.0262 | NR | CDE26200.1 | 1262807 | g8721 | i0 | 35.7 | 0.857142857142857 | 56 | 36 | 85.7 | 0 | 12 | 179 | 192 | 247 | CDE26200.1 putative uncharacterized protein [Clostridium sp. CAG:440] | diamond | 168 | 42.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium sp. CAG:440 | ||
| 30828502 | 30828502 | PRJNA1123686_S_NODE_13014_length_175_cov_7.109589_g12982_i0 | PRJNA1123686 | 13014 | 175 | 7.109589 | 12.44178075 | Lactiplantibacillus plantarum | 1590 | Bacteria | Bacteria | 40 | 0.0475 | NR | WP_252130024.1 | 1590 | g12982 | i0 | 61.8 | 1.16571428571429 | 34 | 13 | 58.3 | 0 | 67 | 168 | 27 | 60 | WP_252130024.1 60S acidic ribosomal protein P2, partial [Lactiplantibacillus plantarum] | diamond | 204 | 40 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Lactiplantibacillus plantarum | ||
| 31133377 | 31133377 | PRJNA1123686_S_NODE_15855_length_165_cov_6.352941_g15823_i0 | PRJNA1123686 | 15855 | 165 | 6.352941 | 10.48235265 | root | 1 | Root_unresolved | Root_unresolved | 99 | 2.09e-25 | NR | WP_305021979.1 | 1590 | g15823 | i0 | 86.8 | 24.0727272727273 | 53 | 7 | 96.4 | 0 | 3 | 161 | 10 | 62 | WP_305021979.1 nucleoside-diphosphate kinase, partial [Lactiplantibacillus plantarum] | diamond | 3972 | 100 | 0.99 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Lactiplantibacillus plantarum | ||
| 31260143 | 31260143 | PRJNA1123686_S_NODE_5915_length_219_cov_658.526316_g5883_i0 | PRJNA1123686 | 5915 | 219 | 658.526316 | 1442.17263204 | root | 1 | Root_unresolved | Root_unresolved | 42.4 | 0.0217 | NR | SJR19085.1 | 1496 | g5883 | i0 | 54.3 | 1.73972602739726 | 35 | 16 | 47.9 | 0 | 5 | 109 | 73 | 107 | SJR19085.1 Uncharacterised protein [Clostridioides difficile] | diamond | 381 | 42.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 31576480 | 31576480 | PRJNA1123686_S_NODE_5916_length_219_cov_643.468421_g5884_i0 | PRJNA1123686 | 5916 | 219 | 643.468421 | 1409.19584199 | root | 1 | Root_unresolved | Root_unresolved | 42.4 | 0.0217 | NR | SJR19085.1 | 1496 | g5884 | i0 | 54.3 | 1.73972602739726 | 35 | 16 | 47.9 | 0 | 5 | 109 | 73 | 107 | SJR19085.1 Uncharacterised protein [Clostridioides difficile] | diamond | 381 | 42.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 32082466 | 32082466 | PRJNA1123686_S_NODE_358_length_408_cov_80.775726_g328_i0 | PRJNA1123686 | 358 | 408 | 80.775726 | 329.56496208 | root | 1 | Root_unresolved | Root_unresolved | 84.3 | 2.74e-17 | NR | QHG80041.1 | 1280 | g328 | i0 | 56.5 | 38.0514705882353 | 115 | 50 | 84.6 | 0 | 406 | 62 | 73 | 187 | QHG80041.1 30S ribosomal protein S13 [Staphylococcus aureus] | diamond | 15525 | 85.1 | 0.990599294947121 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 32430654 | 32430654 | PRJNA1123686_S_NODE_6019_length_218_cov_130.063492_g5987_i0 | PRJNA1123686 | 6019 | 218 | 130.063492 | 283.53841256 | root | 1 | Root_unresolved | Root_unresolved | 42.7 | 0.0156 | NR | SJR19085.1 | 1496 | g5987 | i0 | 54.3 | 0.963302752293578 | 35 | 16 | 48.2 | 0 | 5 | 109 | 73 | 107 | SJR19085.1 Uncharacterised protein [Clostridioides difficile] | diamond | 210 | 42.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;