RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1123686", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1123686 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27449647 27449647 PRJNA1123686_S_NODE_4483_length_235_cov_82.485437_g4451_i0 PRJNA1123686 4483 235 82.485437 193.84077695 Podila humilis 64523 Fungi Fungi 64.7 2.16e-11   NR KAI9236711.1 64523 g4451 i0 57.4 0.868085106382979 68 26 83 1 2 196 22 89 KAI9236711.1 MAG: hypothetical protein BYD32DRAFT_369445, partial [Podila humilis] diamond 204 64.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Podila Podila humilis
27733963 27733963 PRJNA1123686_S_NODE_1064_length_329_cov_64.813333_g1032_i0 PRJNA1123686 1064 329 64.813333 213.23586557 Dissophora globulifera 979702 Fungi Fungi 65.1 2.72e-11   NR KAG0282606.1 979702 g1032 i0 43.1 0.592705167173252 65 37 59.3 0 3 197 12 76 KAG0282606.1 hypothetical protein BGZ98_006693, partial [Dissophora globulifera] diamond 195 65.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Dissophora Dissophora globulifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;