RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA1123436" and tax_phylum = "candidate division WOR-3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WOR-3 · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA1123436 · 8 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14307740 14307740 PRJNA1123436_P_NODE_107492_length_247_cov_0.885057_g106278_i0 PRJNA1123436 107492 247 0.885057 2.18609079 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 121 2.03e-32   NR MCX6840724.1 2052148 g106278 i0 88.2 3.31578947368421 68 8 82.6 0 205 2 2 69 MCX6840724.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [candidate division WOR-3 bacterium] diamond 819 121 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
26838055 26838055 PRJNA1123436_P_NODE_97061_length_251_cov_0.865169_g95847_i0 PRJNA1123436 97061 251 0.865169 2.17157419 Bacteria 2 Bacteria Bacteria 78.6 9.66e-15   NR KPK63420.1 1703779 g95847 i0 43.4 4.92430278884462 83 47 99.2 0 249 1 29 111 KPK63420.1 MAG: hypothetical protein AMJ83_07060 [candidate division WOR_3 bacterium SM23_42] diamond 1236 79 0.994936708860759 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR_3 bacterium SM23_42
27859741 27859741 PRJNA1123436_P_NODE_109385_length_247_cov_0.885057_g108171_i0 PRJNA1123436 109385 247 0.885057 2.18609079 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 60.5 2.1e-8   NR MEO0215667.1 2052148 g108171 i0 52.1 0.862348178137652 71 30 82.6 2 40 243 217 286 MEO0215667.1 hypothetical protein [candidate division WOR-3 bacterium] diamond 213 60.5 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
29564829 29564829 PRJNA1123436_P_NODE_104390_length_248_cov_0.880000_g103176_i0 PRJNA1123436 104390 248 0.88 2.1824 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 145 8.26e-40   NR MCX6841781.1 2052148 g103176 i0 82.9 0.991935483870968 82 14 99.2 0 247 2 193 274 MCX6841781.1 phosphopentomutase [candidate division WOR-3 bacterium] diamond 246 145 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
30702120 30702120 PRJNA1123436_P_NODE_99234_length_250_cov_0.870056_g98020_i0 PRJNA1123436 99234 250 0.870056 2.17514 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 84.3 2.3e-17   NR MBM3332512.1 2052148 g98020 i0 66.7 1.32 63 21 75.6 0 60 248 1 63 MBM3332512.1 class I SAM-dependent methyltransferase [candidate division WOR-3 bacterium] diamond 330 84.3 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
31840091 31840091 PRJNA1123436_P_NODE_117557_length_244_cov_0.900585_g116343_i0 PRJNA1123436 117557 244 0.900585 2.1974274 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 143 7.46e-38   NR MBM3330515.1 2052148 g116343 i0 77.8 0.995901639344262 81 18 99.6 0 2 244 357 437 MBM3330515.1 T9SS type A sorting domain-containing protein [candidate division WOR-3 bacterium] diamond 243 143 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
32441717 32441717 PRJNA1123436_P_NODE_107579_length_247_cov_0.885057_g106365_i0 PRJNA1123436 107579 247 0.885057 2.18609079 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 160 2.8399999999999997e-46   NR MBM3331304.1 2052148 g106365 i0 87.8 0.995951417004049 82 10 99.6 0 247 2 225 306 MBM3331304.1 2Fe-2S iron-sulfur cluster binding domain-containing protein [candidate division WOR-3 bacterium] diamond 246 160 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
32568196 32568196 PRJNA1123436_P_NODE_108399_length_247_cov_0.885057_g107185_i0 PRJNA1123436 108399 247 0.885057 2.18609079 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 97.1 2.3700000000000003e-21   NR MCK4233681.1 2052148 g107185 i0 59.8 1.93117408906883 82 32 99.6 1 246 1 264 344 MCK4233681.1 T9SS type A sorting domain-containing protein [candidate division WOR-3 bacterium] diamond 477 97.1 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;