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contig_metadata

7 rows where bioproject = "PRJNA1123436", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 7 ✖

tax_phylum 1

  • Thermoproteota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1123436 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7407256 7407256 PRJNA1123436_P_NODE_28046_length_487_cov_6.553140_g26838_i0 PRJNA1123436 28046 487 6.55314 31.9137918 root 1 Root_unresolved Root_unresolved 289 3.32e-73   NTclustered gi|471648416|gb|KC661980.1| 29281 g26838 i0 100 81.1108829568789 156 0 85 0 1 156 394 549 Uncultured crenarchaeote clone LC-J-Sd-W3-A12 16S ribosomal RNA gene, partial sequence blastn 39501 289 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
14309690 14309690 PRJNA1123436_P_NODE_95972_length_251_cov_0.865169_g94758_i0 PRJNA1123436 95972 251 0.865169 2.17157419 uncultured crenarchaeote 29281 Archaea Archaea 351 2e-92   NTclustered gi|289470097|gb|GU135501.1| 29281 g94758 i0 99.482 75.2470119521912 193 1 77 0 1 193 194 2 Uncultured crenarchaeote clone Pav-sed-521 16S ribosomal RNA gene, partial sequence blastn 18887 351 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
16331753 16331753 PRJNA1123436_P_NODE_128953_length_219_cov_4.753425_g127739_i0 PRJNA1123436 128953 219 4.753425 10.41000075 root 1 Root_unresolved Root_unresolved 403 4.64e-108   NTclustered gi|332143537|gb|JF694343.1| 29281 g127739 i0 100 99.5433789954338 218 0 99 0 1 218 235 18 Uncultured crenarchaeote clone E2 16S ribosomal RNA gene, partial sequence blastn 21800 403 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
27291520 27291520 PRJNA1123436_P_NODE_103983_length_248_cov_1.074286_g102769_i0 PRJNA1123436 103983 248 1.074286 2.66422928 Thermoproteota archaeon 2056631 Archaea Archaea 115 7.54e-28   NR RDJ35600.1 2056631 g102769 i0 66.3 0.967741935483871 80 27 96.8 0 244 5 60 139 RDJ35600.1 MAG: hypothetical protein DWQ19_12345 [Thermoproteota archaeon] diamond 240 115 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
27891363 27891363 PRJNA1123436_P_NODE_86685_length_265_cov_2.026042_g85471_i0 PRJNA1123436 86685 265 2.026042 5.3690113 Thermoproteota archaeon 2056631 Archaea Archaea 173 1.06e-51   NR MDP9306616.1 2056631 g85471 i0 95.4 0.984905660377358 87 4 98.5 0 263 3 106 192 MDP9306616.1 nucleotide sugar dehydrogenase [Thermoproteota archaeon] diamond 261 173 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
32188411 32188411 PRJNA1123436_P_NODE_96678_length_251_cov_0.865169_g95464_i0 PRJNA1123436 96678 251 0.865169 2.17157419 Staphylothermus marinus 2280 Archaea Archaea 43.5 0.00548   NR WP_011839246.1 2280 g95464 i0 25.9 1.01593625498008 85 57 94.4 1 245 9 20 104 WP_011839246.1 helix-turn-helix domain-containing protein [Staphylothermus marinus] diamond 255 43.5 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Staphylothermus Staphylothermus marinus
32851330 32851330 PRJNA1123436_P_NODE_98220_length_250_cov_0.870056_g97006_i0 PRJNA1123436 98220 250 0.870056 2.17514 Ignisphaera sp. 2268142 Archaea Archaea 92.8 9.22e-20   NR MEM1561276.1 2268142 g97006 i0 56.1 1.98 82 35 98.4 1 3 248 370 450 MEM1561276.1 DNA polymerase [Ignisphaera sp.] diamond 495 92.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Ignisphaera Ignisphaera sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;