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contig_metadata

29 rows where bioproject = "PRJNA1123436" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 29 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1123436 · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13032469 13032469 PRJNA1123436_P_NODE_106131_length_248_cov_0.880000_g104917_i0 PRJNA1123436 106131 248 0.88 2.1824 uncultured Nitrososphaerota archaeon 651141 Archaea Archaea 255 1.59e-63   NTclustered gi|2874253717|emb|OY969559.1| 651141 g104917 i0 87.838 0.895161290322581 222 22 88 5 27 245 1818235 1818016 MAG: uncultured Nitrososphaerota archaeon isolate MFD05512.bin.c.15 genome assembly, chromosome: 1 blastn 222 255 1 Archaea   Thermoproteati Nitrososphaerota         uncultured Nitrososphaerota archaeon
19406595 19406595 PRJNA1123436_P_NODE_92776_length_254_cov_1.508287_g91562_i0 PRJNA1123436 92776 254 1.508287 3.83104898 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 346 9.45e-91   NTclustered gi|808354332|gb|CP011097.2| 1603555 g91562 i0 91.6 0.984251968503937 250 21 98 0 2 251 324868 325117 Candidatus Nitrosotenuis cloacae strain SAT1, complete genome blastn 250 346 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae
21431239 21431239 PRJNA1123436_P_NODE_122757_length_242_cov_0.911243_g121543_i0 PRJNA1123436 122757 242 0.911243 2.20520806 Nitrososphaera 497726 Archaea Archaea 361 3.19e-95   NTclustered gi|647810480|gb|CP007536.1| 926571 g121543 i0 93.75 4.95867768595041 240 15 99 0 3 242 1543534 1543773 Nitrososphaera viennensis EN76, complete genome blastn 1200 361 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera viennensis
21955986 21955986 PRJNA1123436_P_NODE_126858_length_241_cov_0.916667_g125644_i0 PRJNA1123436 126858 241 0.916667 2.20916747 Candidatus Nitrosopolaris sp. 3069383 Archaea Archaea 126 2.18e-33   NR HYV58110.1 3069383 g125644 i0 79.7 4.95435684647303 79 16 98.3 0 241 5 139 217 HYV58110.1 ABC transporter ATP-binding protein [Candidatus Nitrosopolaris sp.] diamond 1194 126 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosopolaris Candidatus Nitrosopolaris sp.
24504876 24504876 PRJNA1123436_P_NODE_111880_length_246_cov_0.890173_g110666_i0 PRJNA1123436 111880 246 0.890173 2.18982558 Nitrosotalea devaniterrae 1078905 Archaea Archaea 261 3.39e-65   NTclustered gi|1003583480|emb|LN890280.1| 1078905 g110666 i0 85.83 2.48373983739837 247 33 100 2 1 246 1706648 1706893 Candidatus Nitrosotalea devanaterra genome assembly, chromosome: 1 blastn 611 261 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Nitrosotalea devaniterrae
26595168 26595168 PRJNA1123436_P_NODE_123941_length_242_cov_0.911243_g122727_i0 PRJNA1123436 123941 242 0.911243 2.20520806 Nitrosopumilales archaeon 2026768 Archaea Archaea 102 3.92e-24   NR TRZ79354.1 2026768 g122727 i0 66.3 0.991735537190083 80 27 99.2 0 3 242 2 81 TRZ79354.1 MAG: PEFG-CTERM sorting domain-containing protein [Nitrosopumilales archaeon] diamond 240 102 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales     Nitrosopumilales archaeon
26932841 26932841 PRJNA1123436_P_NODE_120202_length_243_cov_0.905882_g118988_i0 PRJNA1123436 120202 243 0.905882 2.20129326 Nitrosotalea 1078904 Archaea Archaea 146 1.09e-38   NR WP_245867381.1 1903277 g118988 i0 86.3 6.91358024691358 80 11 98.8 0 241 2 211 290 WP_245867381.1 peptidylprolyl isomerase [Candidatus Nitrosotalea bavarica] diamond 1680 147 0.993197278911565 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Candidatus Nitrosotalea bavarica
26932849 26932849 PRJNA1123436_P_NODE_95162_length_251_cov_0.865169_g93948_i0 PRJNA1123436 95162 251 0.865169 2.17157419 Archaea 2157 Archaea Archaea 135 2.4e-37   NR TLX67932.1 2026795 g93948 i0 79.3 2.9402390438247 82 17 98 0 2 247 7 88 TLX67932.1 MAG: prephenate dehydratase [Nitrososphaerota archaeon] diamond 738 136 0.992647058823529 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
26943569 26943569 PRJNA1123436_P_NODE_117122_length_244_cov_0.900585_g115908_i0 PRJNA1123436 117122 244 0.900585 2.1974274 Candidatus Nitrosopolaris sp. 3069383 Archaea Archaea 122 2.7e-30   NR HYV58422.1 3069383 g115908 i0 68.8 6.25819672131148 80 25 98.4 0 243 4 355 434 HYV58422.1 BamA/TamA family outer membrane protein [Candidatus Nitrosopolaris sp.] diamond 1527 122 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosopolaris Candidatus Nitrosopolaris sp.
27986211 27986211 PRJNA1123436_P_NODE_124105_length_242_cov_0.911243_g122891_i0 PRJNA1123436 124105 242 0.911243 2.20520806 Nitrososphaerota archaeon 2026795 Archaea Archaea 55.5 1.17e-6   NR MEM3509606.1 2026795 g122891 i0 39.5 0.942148760330578 76 44 91.7 1 18 239 245 320 MEM3509606.1 DnaB-like helicase C-terminal domain-containing protein [Nitrososphaerota archaeon] diamond 228 55.5 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
28133395 28133395 PRJNA1123436_P_NODE_112845_length_246_cov_0.861272_g111631_i0 PRJNA1123436 112845 246 0.861272 2.11872912 Nitrososphaera 497726 Archaea Archaea 130 6.27e-34   NR WP_015019103.1 497727 g111631 i0 72.5 1.95121951219512 80 22 97.6 0 244 5 218 297 WP_015019103.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Candidatus Nitrososphaera gargensis] diamond 480 130 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Candidatus Nitrososphaera gargensis
28649352 28649352 PRJNA1123436_P_NODE_107327_length_247_cov_0.885057_g106113_i0 PRJNA1123436 107327 247 0.885057 2.18609079 Nitrosotalea sp. 2833567 Archaea Archaea 133 8.689999999999999e-37   NR MDR3782061.1 2833567 g106113 i0 78 0.995951417004049 82 18 99.6 0 247 2 144 225 MDR3782061.1 hypothetical protein [Nitrosotalea sp.] diamond 246 133 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Nitrosotalea sp.
28985992 28985992 PRJNA1123436_P_NODE_115528_length_245_cov_0.895349_g114314_i0 PRJNA1123436 115528 245 0.895349 2.19360505 Nitrosotalea 1078904 Archaea Archaea 122 2.47e-31   NR CUR51060.1 1078905 g114314 i0 98.4 3.85714285714286 63 1 77.1 0 243 55 323 385 CUR51060.1 Cysteine desulfurase [Nitrosotalea devaniterrae] diamond 945 122 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Nitrosotalea devaniterrae
29217834 29217834 PRJNA1123436_P_NODE_98729_length_250_cov_0.870056_g97515_i0 PRJNA1123436 98729 250 0.870056 2.17514 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 45.1 0.00622   NR MCJ7637061.1 2169593 g97515 i0 36.8 1.668 68 43 81.6 0 247 44 101 168 MCJ7637061.1 DEAD/DEAH box helicase family protein [Nitrososphaeraceae archaeon] diamond 417 45.1 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
29849171 29849171 PRJNA1123436_P_NODE_120931_length_243_cov_0.905882_g119717_i0 PRJNA1123436 120931 243 0.905882 2.20129326 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 124 7.919999999999998e-35   NR MBV9176820.1 2169593 g119717 i0 87.9 0.814814814814815 66 8 81.5 0 45 242 2 67 MBV9176820.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 198 124 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
30122477 30122477 PRJNA1123436_P_NODE_97912_length_250_cov_0.870056_g96698_i0 PRJNA1123436 97912 250 0.870056 2.17514 Nitrososphaeria 1643678 Archaea Archaea 144 9.1e-39   NR WP_101476721.1 1903277 g96698 i0 90.2 3.936 82 8 98.4 0 248 3 72 153 WP_101476721.1 DNA topoisomerase I [Candidatus Nitrosotalea bavarica] diamond 984 144 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Candidatus Nitrosotalea bavarica
30702092 30702092 PRJNA1123436_P_NODE_125394_length_241_cov_1.375000_g124180_i0 PRJNA1123436 125394 241 1.375 3.31375 Nitrososphaerota archaeon 2026795 Archaea Archaea 141 1.08e-38   NR MDA4117257.1 2026795 g124180 i0 88.6 0.983402489626556 79 9 98.3 0 238 2 121 199 MDA4117257.1 molecular chaperone DnaJ [Nitrososphaerota archaeon] diamond 237 141 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
31049992 31049992 PRJNA1123436_P_NODE_122275_length_242_cov_1.526627_g121061_i0 PRJNA1123436 122275 242 1.526627 3.69443734 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 77.4 2.25e-14   NR HEY6883774.1 2169593 g121061 i0 81.9 0.892561983471074 72 11 86.8 1 241 32 542 613 HEY6883774.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 216 77.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31175796 31175796 PRJNA1123436_P_NODE_93075_length_254_cov_0.867403_g91861_i0 PRJNA1123436 93075 254 0.867403 2.20320362 Nitrosotalea sp. 2833567 Archaea Archaea 79 7.67e-15   NR HUM18444.1 2833567 g91861 i0 52.4 0.992125984251969 84 40 99.2 0 1 252 708 791 HUM18444.1 tetratricopeptide repeat protein [Nitrosotalea sp.] diamond 252 79 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Nitrosotalea sp.
31386729 31386729 PRJNA1123436_P_NODE_110656_length_246_cov_0.890173_g109442_i0 PRJNA1123436 110656 246 0.890173 2.18982558 Nitrosotalea 1078904 Archaea Archaea 130 1.4e-35   NR WP_101010288.1 1499975 g109442 i0 82.7 6.91463414634146 81 14 98.8 0 2 244 159 239 WP_101010288.1 indole-3-glycerol phosphate synthase TrpC [Nitrosotalea sinensis] diamond 1701 130 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Nitrosotalea sinensis
31745232 31745232 PRJNA1123436_P_NODE_114497_length_245_cov_0.895349_g113283_i0 PRJNA1123436 114497 245 0.895349 2.19360505 Nitrosarchaeum sp. 2026886 Archaea Archaea 154 1.4099999999999999e-42   NR HEY4680718.1 2026886 g113283 i0 88.9 7.93469387755102 81 9 99.2 0 244 2 338 418 HEY4680718.1 M57 family metalloprotease [Nitrosarchaeum sp.] diamond 1944 154 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
31924256 31924256 PRJNA1123436_P_NODE_120337_length_243_cov_0.905882_g119123_i0 PRJNA1123436 120337 243 0.905882 2.20129326 Thermoproteati 1783275 Archaea Archaea 79 3.07e-15   NR MDG7000619.1 2026795 g119123 i0 51.3 2.87654320987654 76 37 93.8 0 11 238 206 281 MDG7000619.1 UbiA family prenyltransferase [Nitrososphaerota archaeon] diamond 699 79.7 0.991217063989962 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
31935023 31935023 PRJNA1123436_P_NODE_111237_length_246_cov_0.890173_g110023_i0 PRJNA1123436 111237 246 0.890173 2.18982558 Nitrososphaerota archaeon 2026795 Archaea Archaea 62 4.64e-9   NR MDG6998408.1 2026795 g110023 i0 92.1 0.463414634146341 38 3 46.3 0 132 245 1 38 MDG6998408.1 M48 family metalloprotease [Nitrososphaerota archaeon] diamond 114 62 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
31935044 31935044 PRJNA1123436_P_NODE_69257_length_299_cov_2.725664_g68043_i0 PRJNA1123436 69257 299 2.725664 8.14973536 Nitrososphaerota archaeon 2026795 Archaea Archaea 94 6.41e-21   NR MDG6904296.1 2026795 g68043 i0 60.3 0.732441471571906 73 24 68.2 1 205 2 54 126 MDG6904296.1 aldo/keto reductase [Nitrososphaerota archaeon] diamond 219 94 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
32409896 32409896 PRJNA1123436_P_NODE_98739_length_250_cov_0.870056_g97525_i0 PRJNA1123436 98739 250 0.870056 2.17514 Nitrososphaerota archaeon 2026795 Archaea Archaea 63.9 2.51e-11   NR MEM2614616.1 2026795 g97525 i0 58.3 0.576 48 20 57.6 0 6 149 25 72 MEM2614616.1 hypothetical protein [Nitrososphaerota archaeon] diamond 144 63.9 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
32536540 32536540 PRJNA1123436_P_NODE_118099_length_244_cov_0.900585_g116885_i0 PRJNA1123436 118099 244 0.900585 2.1974274 Nitrososphaera sp. 1971748 Archaea Archaea 52.4 1.15e-5   NR HEY1249079.1 1971748 g116885 i0 34.7 0.885245901639344 72 46 87.3 1 29 241 77 148 HEY1249079.1 hypothetical protein [Nitrososphaera sp.] diamond 216 52.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
32788269 32788269 PRJNA1123436_P_NODE_85280_length_268_cov_1.364103_g84066_i0 PRJNA1123436 85280 268 1.364103 3.65579604 Candidatus Nitrosocosmicus sp. 2109671 Archaea Archaea 134 1.99e-35   NR HEY0579235.1 2109671 g84066 i0 70.5 0.985074626865672 88 26 98.5 0 3 266 42 129 HEY0579235.1 transposase [Candidatus Nitrosocosmicus sp.] diamond 264 134 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus sp.
32851271 32851271 PRJNA1123436_P_NODE_100200_length_250_cov_0.870056_g98986_i0 PRJNA1123436 100200 250 0.870056 2.17514 Candidatus Caldarchaeum sp. 2972665 Archaea Archaea 67.4 2.62e-11   NR MEM4189682.1 2972665 g98986 i0 40 0.96 80 48 96 0 7 246 55 134 MEM4189682.1 phosphoadenosine phosphosulfate reductase family protein [Candidatus Caldarchaeum sp.] diamond 240 67.4 1 Archaea   Thermoproteati Nitrososphaerota   Candidatus Caldarchaeales Candidatus Caldarchaeaceae Candidatus Caldarchaeum Candidatus Caldarchaeum sp.
32882693 32882693 PRJNA1123436_P_NODE_100220_length_250_cov_0.870056_g99006_i0 PRJNA1123436 100220 250 0.870056 2.17514 Candidatus Nitrosotenuis sp. 2507556 Archaea Archaea 48.1 1.02e-4   NR MEM3008392.1 2507556 g99006 i0 32.9 0.912 76 45 84 2 41 250 30 105 MEM3008392.1 hypothetical protein [Candidatus Nitrosotenuis sp.] diamond 228 48.1 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;