RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1123436" and tax_phylum = "Candidatus Woeseibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Woeseibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1123436 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5382292 5382292 PRJNA1123436_P_NODE_124045_length_242_cov_0.911243_g122831_i0 PRJNA1123436 124045 242 0.911243 2.20520806 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 153 7.879999999999997e-42   NR HRN70703.1 2026804 g122831 i0 93.8 1.98347107438017 80 5 99.2 0 2 241 404 483 HRN70703.1 molecular chaperone DnaK [Candidatus Woesebacteria bacterium] diamond 480 153 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
19405090 19405090 PRJNA1123436_P_NODE_126816_length_241_cov_0.916667_g125602_i0 PRJNA1123436 126816 241 0.916667 2.20916747 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 110 1.27e-19   NTclustered gi|1950815156|gb|CP066686.1| 2026804 g125602 i0 93.333 0.311203319502075 75 4 31 1 52 125 1059853 1059927 MAG: Candidatus Woesebacteria bacterium isolate NC_groundwater_442_Ag_B-0.1um_40_41 chromosome blastn 75 110 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
28080819 28080819 PRJNA1123436_P_NODE_118205_length_244_cov_0.900585_g116991_i0 PRJNA1123436 118205 244 0.900585 2.1974274 Candidatus Woesebacteria bacterium RIFCSPHIGHO2_ 2026804 Bacteria Bacteria 60.8 1.4e-8   NR OGM19773.1 1802491 g116991 i0 42.5 0.983606557377049 80 43 98.4 3 243 4 246 322 OGM19773.1 MAG: hypothetical protein A2771_01730 [Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_38_26b] diamond 240 60.8 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_38_26b

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;