RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1123436" and tax_phylum = "Candidatus Kryptoniota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kryptoniota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1123436 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28301889 28301889 PRJNA1123436_P_NODE_106106_length_248_cov_0.880000_g104892_i0 PRJNA1123436 106106 248 0.88 2.1824 Candidatus Kryptoniota bacterium 2268186 Bacteria Bacteria 96.3 4.019999999999999e-23   NR HUI27879.1 2268186 g104892 i0 64 1.69354838709677 75 27 90.7 0 244 20 81 155 HUI27879.1 universal stress protein [Candidatus Kryptoniota bacterium] diamond 420 96.3 1 Bacteria FCB group Pseudomonadati Candidatus Kryptoniota         Candidatus Kryptoniota bacterium
29396233 29396233 PRJNA1123436_P_NODE_125769_length_241_cov_0.916667_g124555_i0 PRJNA1123436 125769 241 0.916667 2.20916747 Pseudomonadati 3379134 Bacteria Bacteria 144 9.89e-40   NR HUI25078.1 2268186 g124555 i0 82.5 3.98340248962656 80 14 99.6 0 1 240 160 239 HUI25078.1 amidohydrolase family protein [Candidatus Kryptoniota bacterium] diamond 960 144 1 Bacteria FCB group Pseudomonadati Candidatus Kryptoniota         Candidatus Kryptoniota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;