RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1123436" and tax_phylum = "Candidatus Edwardsiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Edwardsiibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1123436 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28459996 28459996 PRJNA1123436_P_NODE_110866_length_246_cov_0.890173_g109652_i0 PRJNA1123436 110866 246 0.890173 2.18982558 Candidatus Edwardsbacteria bacterium 2053551 Bacteria Bacteria 121 7.539999999999999e-31   NR MDI6740128.1 2053551 g109652 i0 76.9 0.951219512195122 78 18 95.1 0 2 235 45 122 MDI6740128.1 hypothetical protein [Candidatus Edwardsbacteria bacterium] diamond 234 121 1 Bacteria Bacteria candidate phyla   Candidatus Edwardsiibacteriota         Candidatus Edwardsbacteria bacterium
31555850 31555850 PRJNA1123436_P_NODE_119676_length_243_cov_0.905882_g118462_i0 PRJNA1123436 119676 243 0.905882 2.20129326 Candidatus Edwardsbacteria bacterium 2053551 Bacteria Bacteria 112 2.57e-27   NR MEW6686036.1 2053551 g118462 i0 65 0.987654320987654 80 28 98.8 0 2 241 143 222 MEW6686036.1 glycosyltransferase family 2 protein [Candidatus Edwardsbacteria bacterium] diamond 240 112 1 Bacteria Bacteria candidate phyla   Candidatus Edwardsiibacteriota         Candidatus Edwardsbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;