RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1123436", tax_kingdom = "Shotokuvirae" and tax_phylum = "Cressdnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 2 ✖

tax_kingdom 1

  • Shotokuvirae · 2 ✖

bioproject 1

  • PRJNA1123436 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9957941 9957941 PRJNA1123436_P_NODE_70568_length_297_cov_0.892857_g69354_i0 PRJNA1123436 70568 297 0.892857 2.65178529 Viruses 10239 Viruses Viruses 544 3.7299999999999996e-150   NTclustered gi|2333448270|gb|OK491637.1| 2202565 g69354 i0 99.663 27.1178451178451 297 1 100 0 1 297 1448 1152 Genomoviridae sp. strain Gen-120 capsid protein and replication genes, complete cds blastn 8054 544 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
13033577 13033577 PRJNA1123436_P_NODE_51791_length_347_cov_1.124088_g50577_i0 PRJNA1123436 51791 347 1.124088 3.90058536 Genomoviridae sp. 2202565 Viruses Viruses 580 3.3899999999999998e-161   NTclustered gi|2054674741|tpg|BK052473.1| 2202565 g50577 i0 96.83 5.55619596541787 347 11 100 0 1 347 1637 1983 MAG TPA_asm: Genomoviridae sp. isolate ctL1O7, partial genome blastn 1928 580 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;