RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1123436", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 7 ✖

tax_kingdom 1

  • Metazoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1123436 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4107720 4107720 PRJNA1123436_P_NODE_89884_length_259_cov_5.978495_g88670_i0 PRJNA1123436 89884 259 5.978495 15.48430205 Hydractinia carica 2752231 Cnidaria other_Eukaryota 172 1.7399999999999999e-38   NTclustered gi|150368568|emb|AM411418.1| 2752231 g88670 i0 79.518 19.1737451737452 249 46 95 5 14 259 468 222 Hydractinia minuta 16S rRNA gene, haplotype Hydractinia minuta mitochondrial partial 16S rRNA variant New Zealand blastn 4966 172 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia carica
6132778 6132778 PRJNA1123436_P_NODE_76005_length_285_cov_1.641509_g74791_i0 PRJNA1123436 76005 285 1.641509 4.67830065 Aglaophenia 308583 Cnidaria other_Eukaryota 202 2.4699999999999997e-47   NTclustered gi|1551494896|gb|MH282606.1| 475195 g74791 i0 91.216 52.4912280701754 148 13 52 0 138 285 279 426 Aglaophenia lophocarpa voucher DOP C4317 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 14960 204 0.990196078431373 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Aglaopheniidae Aglaophenia Aglaophenia lophocarpa
13034231 13034231 PRJNA1123436_P_NODE_83471_length_271_cov_24.686869_g82257_i0 PRJNA1123436 83471 271 24.686869 66.90141499 Liriope tetraphylla 37524 Cnidaria other_Eukaryota 407 4.6e-109   NTclustered gi|952952540|gb|KT809327.1| 37524 g82257 i0 94.981 95.5830258302583 259 13 96 0 13 271 2581 2839 Liriope tetraphylla mitochondrion, partial genome blastn 25903 407 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Limnomedusae Geryoniidae Liriope Liriope tetraphylla
16331750 16331750 PRJNA1123436_P_NODE_128193_length_237_cov_5.140244_g126979_i0 PRJNA1123436 128193 237 5.140244 12.18237828 Scleractinia 6125 Cnidaria other_Eukaryota 399 6.589999999999999e-107   NTclustered gi|2889125804|gb|PQ875201.1| 51068 g126979 i0 98.667 94.6708860759494 225 3 95 0 13 237 1630 1406 Sandalolitha robusta isolate 3209F mitochondrion, complete genome blastn 22437 399 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Fungiidae Sandalolitha Sandalolitha robusta
18130984 18130984 PRJNA1123436_P_NODE_128215_length_237_cov_2.487805_g127001_i0 PRJNA1123436 128215 237 2.487805 5.89609785 Heterocyathus sulcatus 2962709 Cnidaria other_Eukaryota 375 1.1099999999999998e-99   NTclustered gi|2289431949|ref|NC_065774.1| 2962709 g127001 i0 96.889 95.0210970464135 225 5 95 2 13 237 17883 17661 Heterocyathus sulcatus mitochondrion, complete genome blastn 22520 375 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Caryophylliidae Heterocyathus Heterocyathus sulcatus
21956015 21956015 PRJNA1123436_P_NODE_128358_length_234_cov_7.583851_g127144_i0 PRJNA1123436 128358 234 7.583851 17.74621134 Actinernus elongatus 1499596 Cnidaria other_Eukaryota 388 1.41e-103   NTclustered gi|636577067|gb|KJ482930.1| 1499596 g127144 i0 98.198 95.457264957265 222 4 95 0 13 234 320 99 Actinernus elongatus isolate acus 12S small subunit ribosomal RNA (rns) gene, partial sequence; mitochondrial blastn 22337 388 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actinernidae Actinernus Actinernus elongatus
29238458 29238458 PRJNA1123436_P_NODE_126289_length_241_cov_0.916667_g125075_i0 PRJNA1123436 126289 241 0.916667 2.20916747 Opisthokonta 33154 Cnidaria other_Eukaryota 71.6 2.47e-12   NR XP_057305551.1 13093 g125075 i0 44 5.66390041493776 75 42 93.4 0 17 241 290 364 XP_057305551.1 elongation factor-like GTPase 1 isoform X1 [Hydractinia symbiolongicarpus] diamond 1365 71.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;