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contig_metadata

9 rows where bioproject = "PRJNA1123436", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 9 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 9 ✖

bioproject 1

  • PRJNA1123436 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1553577 1553577 PRJNA1123436_P_NODE_115282_length_245_cov_0.895349_g114068_i0 PRJNA1123436 115282 245 0.895349 2.19360505 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 112 4.270000000000001e-27   NR HPA77514.1 2212473 g114068 i0 69.1 2.03265306122449 81 21 99.2 2 3 245 247 323 HPA77514.1 ATP-dependent Clp protease ATP-binding subunit ClpX [Kiritimatiellia bacterium] diamond 498 112 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
27375814 27375814 PRJNA1123436_P_NODE_118443_length_244_cov_0.900585_g117229_i0 PRJNA1123436 118443 244 0.900585 2.1974274 Pseudomonadati 3379134 Bacteria Bacteria 103 1.5e-23   NR MCF7849805.1 2202731 g117229 i0 57.7 3.82377049180328 78 33 95.9 0 243 10 639 716 MCF7849805.1 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [Kiritimatiellales bacterium] diamond 933 103 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales     Kiritimatiellales bacterium
28827708 28827708 PRJNA1123436_P_NODE_125968_length_241_cov_0.916667_g124754_i0 PRJNA1123436 125968 241 0.916667 2.20916747 Pseudomonadati 3379134 Bacteria Bacteria 107 4.7099999999999995e-25   NR MDD4870584.1 2212473 g124754 i0 77.4 5.5643153526971 62 14 77.2 0 3 188 412 473 MDD4870584.1 Gfo/Idh/MocA family oxidoreductase [Kiritimatiellia bacterium] diamond 1341 108 0.990740740740741 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
29375436 29375436 PRJNA1123436_P_NODE_121769_length_243_cov_0.905882_g120555_i0 PRJNA1123436 121769 243 0.905882 2.20129326 Kiritimatiellota bacterium 2599938 Bacteria Bacteria 154 1.35e-43   NR MCX7007161.1 2599938 g120555 i0 91.3 1.97530864197531 80 7 98.8 0 242 3 192 271 MCX7007161.1 hypothetical protein [Kiritimatiellota bacterium] diamond 480 154 1 Bacteria PVC group Pseudomonadati Kiritimatiellota         Kiritimatiellota bacterium
29501641 29501641 PRJNA1123436_P_NODE_112810_length_246_cov_0.872832_g111596_i0 PRJNA1123436 112810 246 0.872832 2.14716672 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 75.9 4.44e-14   NR MBN1676876.1 2212473 g111596 i0 46.9 0.98780487804878 81 42 97.6 1 3 242 180 260 MBN1676876.1 flagellar basal body P-ring formation protein FlgA [Kiritimatiellia bacterium] diamond 243 75.9 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
31039146 31039146 PRJNA1123436_P_NODE_109335_length_247_cov_0.885057_g108121_i0 PRJNA1123436 109335 247 0.885057 2.18609079 Pseudomonadati 3379134 Bacteria Bacteria 77.4 7.14e-16   NR MCO5061725.1 2212473 g108121 i0 78.4 1.79757085020243 74 15 88.7 1 27 245 1 74 MCO5061725.1 TM2 domain-containing protein [Kiritimatiellia bacterium] diamond 444 77.8 0.994858611825193 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
31144034 31144034 PRJNA1123436_P_NODE_108975_length_247_cov_0.885057_g107761_i0 PRJNA1123436 108975 247 0.885057 2.18609079 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 55.1 1.71e-6   NR MFO7870226.1 2212473 g107761 i0 39.7 0.947368421052632 78 46 94.7 1 12 245 219 295 MFO7870226.1 hypothetical protein [Kiritimatiellia bacterium] diamond 234 55.1 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
31618799 31618799 PRJNA1123436_P_NODE_108016_length_247_cov_0.885057_g106802_i0 PRJNA1123436 108016 247 0.885057 2.18609079 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 74.3 7.15e-14   NR MFO1490967.1 2212473 g106802 i0 50.7 1.71255060728745 71 35 86.2 0 234 22 88 158 MFO1490967.1 hypothetical protein [Kiritimatiellia bacterium] diamond 423 74.3 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
32693821 32693821 PRJNA1123436_P_NODE_111160_length_246_cov_0.890173_g109946_i0 PRJNA1123436 111160 246 0.890173 2.18982558 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 65.5 7.31e-12   NR MBN1674046.1 2212473 g109946 i0 47.9 0.865853658536585 71 37 86.6 0 232 20 7 77 MBN1674046.1 hypothetical protein [Kiritimatiellia bacterium] diamond 213 65.5 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;