RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1123436", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_phylum = "Nitrospinota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrospinota · 4 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 4 ✖

bioproject 1

  • PRJNA1123436 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28838632 28838632 PRJNA1123436_P_NODE_123728_length_242_cov_0.911243_g122514_i0 PRJNA1123436 123728 242 0.911243 2.20520806 Nitrospinota bacterium 2026769 Bacteria Bacteria 84.3 4.51e-19   NR MBI5814349.1 2026769 g122514 i0 67.2 0.71900826446281 58 19 71.9 0 242 69 45 102 MBI5814349.1 nucleotidyltransferase domain-containing protein [Nitrospinota bacterium] diamond 174 84.3 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
29564868 29564868 PRJNA1123436_P_NODE_69310_length_299_cov_2.203540_g68096_i0 PRJNA1123436 69310 299 2.20354 6.5885846 Nitrospinota bacterium 2026769 Bacteria Bacteria 98.2 1.28e-21   NR HBK80997.1 2026769 g68096 i0 92 1.00334448160535 50 4 50.2 0 150 1 282 331 HBK80997.1 diaminopimelate decarboxylase [Nitrospinota bacterium] diamond 300 98.2 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
30912620 30912620 PRJNA1123436_P_NODE_115594_length_245_cov_0.895349_g114380_i0 PRJNA1123436 115594 245 0.895349 2.19360505 Pseudomonadati 3379134 Bacteria Bacteria 113 4.6500000000000005e-27   NR GJL77223.1 2358456 g114380 i0 62.5 1.9469387755102 80 30 98 0 241 2 895 974 GJL77223.1 MAG: adenine methyltransferase [Nitrospinaceae bacterium] diamond 477 114 0.991228070175439 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales Nitrospinaceae   Nitrospinaceae bacterium
31133375 31133375 PRJNA1123436_P_NODE_91935_length_256_cov_1.229508_g90721_i0 PRJNA1123436 91935 256 1.229508 3.14754048 Bacteria 2 Bacteria Bacteria 70.5 1.18e-12   NR MCH7645932.1 2026769 g90721 i0 46.5 5.02734375 86 42 96.1 2 248 3 81 166 MCH7645932.1 uracil-DNA glycosylase [Nitrospinota bacterium] diamond 1287 71.2 0.990168539325843 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;