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contig_metadata

11 rows where bioproject = "PRJNA1123436", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 11 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 11 ✖

bioproject 1

  • PRJNA1123436 · 11 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27101764 27101764 PRJNA1123436_P_NODE_124522_length_242_cov_0.911243_g123308_i0 PRJNA1123436 124522 242 0.911243 2.20520806 Ignavibacteria bacterium 2053306 Bacteria Bacteria 69.7 8.53e-12   NR NLT52818.1 2053306 g123308 i0 62.7 3.19834710743802 51 19 63.2 0 6 158 280 330 NLT52818.1 NAD(P)-dependent glycerol-3-phosphate dehydrogenase [Ignavibacteria bacterium] diamond 774 69.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
27418135 27418135 PRJNA1123436_P_NODE_126103_length_241_cov_0.916667_g124889_i0 PRJNA1123436 126103 241 0.916667 2.20916747 Ignavibacteria bacterium 2053306 Bacteria Bacteria 130 1.28e-33   NR MBI1807045.1 2053306 g124889 i0 78.5 1.96680497925311 79 17 98.3 0 239 3 360 438 MBI1807045.1 hypothetical protein [Ignavibacteria bacterium] diamond 474 130 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
27575770 27575770 PRJNA1123436_P_NODE_114884_length_245_cov_0.895349_g113670_i0 PRJNA1123436 114884 245 0.895349 2.19360505 Ignavibacteria bacterium 2053306 Bacteria Bacteria 82 1.54e-18   NR HEY5533944.1 2053306 g113670 i0 71.4 0.514285714285714 42 12 51.4 0 243 118 27 68 HEY5533944.1 hypothetical protein [Ignavibacteria bacterium] diamond 126 82 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
28270207 28270207 PRJNA1123436_P_NODE_98686_length_250_cov_0.870056_g97472_i0 PRJNA1123436 98686 250 0.870056 2.17514 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 140 3.2699999999999996e-37   NR MBK7229510.1 2049428 g97472 i0 85.4 3.936 82 12 98.4 0 3 248 265 346 MBK7229510.1 M20/M25/M40 family metallo-hydrolase [Ignavibacteriales bacterium] diamond 984 140 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
28301887 28301887 PRJNA1123436_P_NODE_105186_length_248_cov_0.880000_g103972_i0 PRJNA1123436 105186 248 0.88 2.1824 Rosettibacter primus 3111523 Bacteria Bacteria 96.3 1.3e-21   NR WP_353677527.1 3111523 g103972 i0 84.3 1.23387096774194 51 8 61.7 0 153 1 3 53 WP_353677527.1 L-glyceraldehyde 3-phosphate reductase [Rosettibacter primus] diamond 306 96.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae Rosettibacter Rosettibacter primus
28301938 28301938 PRJNA1123436_P_NODE_96666_length_251_cov_0.865169_g95452_i0 PRJNA1123436 96666 251 0.865169 2.17157419 Ignavibacteria bacterium 2053306 Bacteria Bacteria 138 1.5e-36   NR HMQ79148.1 2053306 g95452 i0 81.9 5.95219123505976 83 15 99.2 0 251 3 24 106 HMQ79148.1 glutamate--tRNA ligase [Ignavibacteria bacterium] diamond 1494 138 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
28933466 28933466 PRJNA1123436_P_NODE_101928_length_249_cov_0.875000_g100714_i0 PRJNA1123436 101928 249 0.875 2.17875 Ignavibacteria bacterium 2053306 Bacteria Bacteria 62.8 3.36e-9   NR MBK6877100.1 2053306 g100714 i0 68.3 0.493975903614458 41 13 49.4 0 1 123 15 55 MBK6877100.1 hypothetical protein [Ignavibacteria bacterium] diamond 123 62.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
29312319 29312319 PRJNA1123436_P_NODE_107309_length_247_cov_0.885057_g106095_i0 PRJNA1123436 107309 247 0.885057 2.18609079 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 46.6 7.4e-4   NR MCK9281694.1 2614255 g106095 i0 37.1 0.753036437246964 62 38 75.3 1 62 247 1 61 MCK9281694.1 hypothetical protein [Melioribacteraceae bacterium] diamond 186 46.6 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium
29438244 29438244 PRJNA1123436_P_NODE_122830_length_242_cov_0.911243_g121616_i0 PRJNA1123436 122830 242 0.911243 2.20520806 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 97.1 2.2400000000000003e-21   NR MBI4811147.1 2049428 g121616 i0 75 0.84297520661157 68 17 84.3 0 37 240 130 197 MBI4811147.1 hypothetical protein [Ignavibacteriales bacterium] diamond 204 97.1 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
30544221 30544221 PRJNA1123436_P_NODE_77933_length_282_cov_1.110048_g76719_i0 PRJNA1123436 77933 282 1.110048 3.13033536 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 99 7.36e-25   NR MCK7517966.1 2049428 g76719 i0 70 0.74468085106383 70 21 74.5 0 3 212 11 80 MCK7517966.1 hypothetical protein [Ignavibacteriales bacterium] diamond 210 99 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
31618833 31618833 PRJNA1123436_P_NODE_73476_length_290_cov_1.258065_g72262_i0 PRJNA1123436 73476 290 1.258065 3.6483885 Ignavibacteria bacterium 2053306 Bacteria Bacteria 48.5 2.89e-4   NR HED37672.1 2053306 g72262 i0 28.4 0.982758620689655 95 65 95.2 1 289 14 78 172 HED37672.1 hypothetical protein [Ignavibacteria bacterium] diamond 285 48.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;