contig_metadata
10 rows where bioproject = "PRJNA1123436", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 280086 | 280086 | PRJNA1123436_P_NODE_60121_length_321_cov_56.995968_g58907_i0 | PRJNA1123436 | 60121 | 321 | 56.995968 | 182.95705728 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 267 | 9.88e-67 | NTclustered | gi|1958056460|gb|CP064986.1| | 2052160 | g58907 | i0 | 97.436 | 76.3426791277259 | 156 | 4 | 92 | 0 | 3 | 158 | 2982697 | 2982852 | Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome | blastn | 24506 | 267 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 1554696 | 1554696 | PRJNA1123436_P_NODE_60122_length_321_cov_56.717742_g58908_i0 | PRJNA1123436 | 60122 | 321 | 56.717742 | 182.06395182 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 267 | 9.88e-67 | NTclustered | gi|1958056460|gb|CP064986.1| | 2052160 | g58908 | i0 | 97.436 | 75.6666666666667 | 156 | 4 | 92 | 0 | 164 | 319 | 2982852 | 2982697 | Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome | blastn | 24289 | 267 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 11759244 | 11759244 | PRJNA1123436_P_NODE_90090_length_259_cov_1.408602_g88876_i0 | PRJNA1123436 | 90090 | 259 | 1.408602 | 3.64827918 | Bacteria | 2 | Bacteria | Bacteria | 163 | 2.1200000000000001e-44 | NR | MCL2690240.1 | 2604142 | g88876 | i0 | 90.7 | 9.96138996138996 | 86 | 8 | 99.6 | 0 | 1 | 258 | 753 | 838 | MCL2690240.1 DNA mismatch repair protein MutS [Chitinispirillia bacterium] | diamond | 2580 | 164 | 0.99390243902439 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Chitinispirillia | Chitinispirillia bacterium | ||||
| 15582852 | 15582852 | PRJNA1123436_P_NODE_57573_length_328_cov_83.227451_g56359_i0 | PRJNA1123436 | 57573 | 328 | 83.227451 | 272.98603928 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 267 | 1.01e-66 | NTclustered | gi|1958056460|gb|CP064986.1| | 2052160 | g56359 | i0 | 97.436 | 79.2774390243902 | 156 | 4 | 93 | 0 | 171 | 326 | 2982852 | 2982697 | Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome | blastn | 26003 | 267 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 15582880 | 15582880 | PRJNA1123436_P_NODE_59053_length_324_cov_141.354582_g57839_i0 | PRJNA1123436 | 59053 | 324 | 141.354582 | 457.98884568 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 250 | 1.01e-61 | NTclustered | gi|1958056460|gb|CP064986.1| | 2052160 | g57839 | i0 | 96.078 | 78.1543209876543 | 153 | 6 | 90 | 0 | 14 | 166 | 2062342 | 2062190 | Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome | blastn | 25322 | 250 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 18132013 | 18132013 | PRJNA1123436_P_NODE_71455_length_294_cov_162.556561_g70241_i0 | PRJNA1123436 | 71455 | 294 | 162.556561 | 477.91628934 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 224 | 5.459999999999999e-54 | NTclustered | gi|1958056460|gb|CP064986.1| | 2052160 | g70241 | i0 | 95.714 | 60.9489795918367 | 140 | 4 | 95 | 2 | 154 | 292 | 2062074 | 2061936 | Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome | blastn | 17919 | 224 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 26911954 | 26911954 | PRJNA1123436_P_NODE_123962_length_242_cov_0.911243_g122748_i0 | PRJNA1123436 | 123962 | 242 | 0.911243 | 2.20520806 | Fibrobacter sp. | 35828 | Bacteria | Bacteria | 72 | 1.39e-12 | NR | NLE01892.1 | 35828 | g122748 | i0 | 69 | 0.520661157024793 | 42 | 13 | 52.1 | 0 | 2 | 127 | 315 | 356 | NLE01892.1 DUF362 domain-containing protein [Fibrobacter sp.] | diamond | 126 | 72 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | Fibrobacterales | Fibrobacteraceae | Fibrobacter | Fibrobacter sp. | |
| 30070128 | 30070128 | PRJNA1123436_P_NODE_119512_length_243_cov_1.005882_g118298_i0 | PRJNA1123436 | 119512 | 243 | 1.005882 | 2.44429326 | Chitinivibrionales bacterium | 2663014 | Bacteria | Bacteria | 134 | 7.189999999999998e-35 | NR | MBN1984137.1 | 2663014 | g118298 | i0 | 80 | 6.88888888888889 | 80 | 16 | 98.8 | 0 | 241 | 2 | 216 | 295 | MBN1984137.1 DUF3883 domain-containing protein [Chitinivibrionales bacterium] | diamond | 1674 | 134 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Chitinivibrionia | Chitinivibrionales | Chitinivibrionales bacterium | |||
| 30070168 | 30070168 | PRJNA1123436_P_NODE_98592_length_250_cov_0.870056_g97378_i0 | PRJNA1123436 | 98592 | 250 | 0.870056 | 2.17514 | Fibrobacter sp. | 35828 | Bacteria | Bacteria | 53.9 | 3.77e-6 | NR | NLD99924.1 | 35828 | g97378 | i0 | 46.1 | 1.884 | 76 | 35 | 87.6 | 2 | 230 | 12 | 153 | 225 | NLD99924.1 flagellin [Fibrobacter sp.] | diamond | 471 | 53.9 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | Fibrobacterales | Fibrobacteraceae | Fibrobacter | Fibrobacter sp. | |
| 30596348 | 30596348 | PRJNA1123436_P_NODE_121333_length_243_cov_0.905882_g120119_i0 | PRJNA1123436 | 121333 | 243 | 0.905882 | 2.20129326 | Bacteria | 2 | Bacteria | Bacteria | 61.6 | 8.41e-9 | NR | MDB5049237.1 | 2052160 | g120119 | i0 | 56.3 | 6.67901234567901 | 64 | 28 | 79 | 0 | 2 | 193 | 1847 | 1910 | MDB5049237.1 hypothetical protein [Fibrobacterota bacterium] | diamond | 1623 | 61.6 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;