RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1123309" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1123309 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30038603 30038603 PRJNA1123309_P_NODE_49231_length_252_cov_0.871508_g48851_i0 PRJNA1123309 49231 252 0.871508 2.19620016 Minisyncoccota bacterium 2053589 Bacteria Bacteria 110 3.39e-28   NR HUQ30000.1 2053589 g48851 i0 67.1 0.94047619047619 79 26 94 0 14 250 18 96 HUQ30000.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 237 110 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30217277 30217277 PRJNA1123309_P_NODE_36432_length_279_cov_1.514563_g36052_i0 PRJNA1123309 36432 279 1.514563 4.22563077 Bacillati 1783272 Bacteria Bacteria 60.8 2.25e-8   NR MDR3549629.1 2053589 g36052 i0 42.2 1.82795698924731 83 41 81.7 2 30 257 194 276 MDR3549629.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 510 60.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31018122 31018122 PRJNA1123309_P_NODE_64735_length_243_cov_0.917647_g64355_i0 PRJNA1123309 64735 243 0.917647 2.22988221 Minisyncoccota bacterium 2053589 Bacteria Bacteria 152 8.289999999999999e-45   NR MDR3571298.1 2053589 g64355 i0 86.3 0.987654320987654 80 11 98.8 0 1 240 70 149 MDR3571298.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 240 152 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32756873 32756873 PRJNA1123309_P_NODE_29280_length_300_cov_2.008811_g28900_i0 PRJNA1123309 29280 300 2.008811 6.026433 Minisyncoccota bacterium 2053589 Bacteria Bacteria 55.8 5.7e-7   NR MBP9760198.1 2053589 g28900 i0 36.6 4.66 93 51 91 2 23 295 37 123 MBP9760198.1 50S ribosomal protein L6 [Candidatus Paceibacterota bacterium] diamond 1398 55.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;