RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1123309" and tax_phylum = "Candidatus Dormiibacterota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1123309 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13032167 13032167 PRJNA1123309_P_NODE_55291_length_248_cov_1.211429_g54911_i0 PRJNA1123309 55291 248 1.211429 3.00434392 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 159 3.5399999999999996e-45   NR HLB75860.1 2052315 g54911 i0 91.5 0.991935483870968 82 7 99.2 0 3 248 33 114 HLB75860.1 IS701 family transposase [Candidatus Dormiibacterota bacterium] diamond 246 159 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
28996839 28996839 PRJNA1123309_P_NODE_55428_length_248_cov_0.891429_g55048_i0 PRJNA1123309 55428 248 0.891429 2.21074392 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 43.9 0.0151   NR MDA8330044.1 2052315 g55048 i0 36.3 1.1008064516129 91 41 94.4 3 2 235 354 440 MDA8330044.1 pitrilysin family protein [Candidatus Dormiibacterota bacterium] diamond 273 43.9 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29312299 29312299 PRJNA1123309_P_NODE_47089_length_253_cov_0.866667_g46709_i0 PRJNA1123309 47089 253 0.866667 2.19266751 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 44.7 0.00803   NR HLH68469.1 2052315 g46709 i0 36.2 0.818181818181818 69 39 79.4 3 43 243 86 151 HLH68469.1 mycofactocin-coupled SDR family oxidoreductase [Candidatus Dormiibacterota bacterium] diamond 207 44.7 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;