RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1123309" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1123309 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28270141 28270141 PRJNA1123309_P_NODE_47786_length_253_cov_0.866667_g47406_i0 PRJNA1123309 47786 253 0.866667 2.19266751 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 129 7.17e-33   NR HEX4988698.1 2838779 g47406 i0 96.9 1.54150197628458 65 2 77.1 0 51 245 1 65 HEX4988698.1 AAA family ATPase [Candidatus Binatia bacterium] diamond 390 129 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28870178 28870178 PRJNA1123309_P_NODE_47308_length_253_cov_0.866667_g46928_i0 PRJNA1123309 47308 253 0.866667 2.19266751 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 90.9 2.81e-20   NR HEX4987397.1 2838779 g46928 i0 100 1.03162055335968 43 0 51 0 117 245 17 59 HEX4987397.1 ABC transporter substrate-binding protein [Candidatus Binatia bacterium] diamond 261 90.9 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;