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contig_metadata

13 rows where bioproject = "PRJNA1123309" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA1123309 · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18130153 18130153 PRJNA1123309_P_NODE_43835_length_261_cov_1.228723_g43455_i0 PRJNA1123309 43835 261 1.228723 3.20696703 Pyrococcus furiosus 2261 Archaea Archaea 177 6.94e-50   NR 4AHC_A 2261 g43455 i0 100 9.88505747126437 86 0 98.9 0 3 260 206 291 4AHC_A Chain A, DNA POLYMERASE [Pyrococcus furiosus] diamond 2580 177 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
20155400 20155400 PRJNA1123309_P_NODE_39096_length_273_cov_1.160000_g38716_i0 PRJNA1123309 39096 273 1.16 3.1668 root 1 Root_unresolved Root_unresolved 492 1.2499999999999996e-134   NTclustered gi|2515741548|gb|CP117271.1| 2209 g38716 i0 100 98.0476190476191 266 0 97 0 1 266 3941703 3941968 Mutant Methanosarcina mazei strain Mm Mut 208, complete genome blastn 26767 492 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina mazei
23230732 23230732 PRJNA1123309_P_NODE_46699_length_253_cov_1.700000_g46319_i0 PRJNA1123309 46699 253 1.7 4.301 Salinirarus marinus 3068310 Archaea Archaea 56.5 0.002   NTclustered gi|2563036160|gb|CP132292.1| 3068310 g46319 i0 96.97 0.130434782608696 33 1 13 0 180 212 930919 930887 Haloferacaceae archaeon XH8 chromosome, complete genome blastn 33 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Salinirarus Salinirarus marinus
26626990 26626990 PRJNA1123309_P_NODE_53601_length_249_cov_1.301136_g53221_i0 PRJNA1123309 53601 249 1.301136 3.23982864 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 47 0.00127   NR RJU88526.1 2163009 g53221 i0 40.8 0.855421686746988 71 40 85.5 1 23 235 485 553 RJU88526.1 MAG: hypothetical protein DWC02_01490, partial [Candidatus Poseidoniales archaeon] diamond 213 47 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
27280733 27280733 PRJNA1123309_P_NODE_30843_length_293_cov_3.581818_g30463_i0 PRJNA1123309 30843 293 3.581818 10.49472674 root 1 Root_unresolved Root_unresolved 205 6.86e-60   NR 4AHC_A 2261 g30463 i0 100 1.98634812286689 97 0 99.3 0 293 3 422 518 4AHC_A Chain A, DNA POLYMERASE [Pyrococcus furiosus] diamond 582 205 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
27323084 27323084 PRJNA1123309_P_NODE_15463_length_393_cov_1.896875_g15084_i0 PRJNA1123309 15463 393 1.896875 7.45471875 Pyrococcus furiosus 2261 Archaea Archaea 261 2.73e-80   NR 4AHC_A 2261 g15084 i0 97.7 1 131 3 100 0 393 1 14 144 4AHC_A Chain A, DNA POLYMERASE [Pyrococcus furiosus] diamond 393 261 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
27828346 27828346 PRJNA1123309_P_NODE_57304_length_247_cov_0.896552_g56924_i0 PRJNA1123309 57304 247 0.896552 2.21448344 Candidatus Methanophagales archaeon 2056316 Archaea Archaea 46.6 0.00168   NR MCD6210180.1 2056316 g56924 i0 46.8 2.89068825910931 47 25 57.1 0 32 172 53 99 MCD6210180.1 transposase [Candidatus Methanophagales archaeon] diamond 714 46.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Candidatus Methanophagales     Candidatus Methanophagales archaeon
27954621 27954621 PRJNA1123309_P_NODE_26725_length_312_cov_2.974895_g26345_i0 PRJNA1123309 26725 312 2.974895 9.2816724 Methanocella arvoryzae 1175445 Archaea Archaea 65.5 8.38e-10   NR WP_012035946.1 1175445 g26345 i0 68.1 0.451923076923077 47 15 45.2 0 303 163 35 81 WP_012035946.1 prephenate dehydrogenase/arogenate dehydrogenase family protein [Methanocella arvoryzae] diamond 141 65.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales Methanocellaceae Methanocella Methanocella arvoryzae
28575225 28575225 PRJNA1123309_P_NODE_29567_length_299_cov_1.292035_g29187_i0 PRJNA1123309 29567 299 1.292035 3.86318465 root 1 Root_unresolved Root_unresolved 64.3 6.13e-10   NR HLF07260.1 1906666 g29187 i0 62.5 2.47826086956522 48 18 48.2 0 285 142 166 213 HLF07260.1 GTP cyclohydrolase II [Thermoplasmata archaeon] diamond 741 64.3 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28996836 28996836 PRJNA1123309_P_NODE_52088_length_250_cov_0.881356_g51708_i0 PRJNA1123309 52088 250 0.881356 2.20339 Candidatus Methanogaster sp. ANME-2c ERB4 2759911 Archaea Archaea 93.2 4.19e-20   NR QNO45974.1 2759911 g51708 i0 71 2.232 62 18 74.4 0 65 250 1 62 QNO45974.1 hypothetical protein EBOGGPCF_00019 [Candidatus Methanogaster sp. ANME-2c ERB4] diamond 558 93.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanogasteraceae Candidatus Methanogaster Candidatus Methanogaster sp. ANME-2c ERB4
29996359 29996359 PRJNA1123309_P_NODE_9431_length_490_cov_2.268585_g9056_i0 PRJNA1123309 9431 490 2.268585 11.1160665 root 1 Root_unresolved Root_unresolved 309 5.14e-98   NR 4AHC_A 2261 g9056 i0 100 1.91632653061225 156 0 95.5 0 3 470 620 775 4AHC_A Chain A, DNA POLYMERASE [Pyrococcus furiosus] diamond 939 310 0.996774193548387 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
30702046 30702046 PRJNA1123309_P_NODE_13074_length_423_cov_1.297143_g12698_i0 PRJNA1123309 13074 423 1.297143 5.48691489 Candidatus Methanocrinis natronophilus 3033396 Archaea Archaea 48.9 0.00161   NR WP_316965640.1 3033396 g12698 i0 28.5 0.971631205673759 137 85 93.6 6 414 19 58 186 WP_316965640.1 PQQ-binding-like beta-propeller repeat protein [Candidatus Methanocrinis natronophilus] diamond 411 48.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanocrinis Candidatus Methanocrinis natronophilus
31903438 31903438 PRJNA1123309_P_NODE_52297_length_250_cov_0.881356_g51917_i0 PRJNA1123309 52297 250 0.881356 2.20339 Thermoplasmata archaeon 1906666 Archaea Archaea 70.9 2.84e-12   NR RLF65297.1 1906666 g51917 i0 50.8 0.732 61 30 73.2 0 184 2 192 252 RLF65297.1 MAG: hypothetical protein DRN30_04235 [Thermoplasmata archaeon] diamond 183 70.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;