RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1123309", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1123309 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20679599 20679599 PRJNA1123309_P_NODE_23957_length_327_cov_3.287402_g23577_i0 PRJNA1123309 23957 327 3.287402 10.74980454 Eukaryota 2759 Fungi Fungi 140 6.87e-36   NR ORZ32782.1 765915 g23577 i0 61.1 3.96330275229358 108 42 99.1 0 326 3 626 733 ORZ32782.1 P-type cation-transporting ATPase [Catenaria anguillulae PL171] diamond 1296 140 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
24504493 24504493 PRJNA1123309_P_NODE_57780_length_247_cov_0.896552_g57400_i0 PRJNA1123309 57780 247 0.896552 2.21448344 Catenomyces persicinus 281913 Fungi Fungi 313 9.28e-81   NTclustered gi|82398336|gb|DQ273789.1| 281913 g57400 i0 90.417 96.6801619433198 240 20 97 3 4 242 1943 1706 Catenomyces sp. JEL342 isolate AFTOL-ID 47 28S ribosomal RNA gene, partial sequence blastn 23880 313 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenomyces Catenomyces persicinus
29648413 29648413 PRJNA1123309_P_NODE_26170_length_315_cov_1.739669_g25790_i0 PRJNA1123309 26170 315 1.739669 5.47995735 Fungi 4751 Fungi Fungi 71.2 2.86e-12   NR KAI9216539.1 64508 g25790 i0 73.1 1.02857142857143 52 14 49.5 0 9 164 193 244 KAI9216539.1 ribulose-phosphate 3-epimerase [Blastocladiella britannica] diamond 324 71.2 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;