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contig_metadata

6 rows where bioproject = "PRJNA1123309", tax_clade = "Stenosarchaea group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 6 ✖

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 6 ✖

bioproject 1

  • PRJNA1123309 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20155400 20155400 PRJNA1123309_P_NODE_39096_length_273_cov_1.160000_g38716_i0 PRJNA1123309 39096 273 1.16 3.1668 root 1 Root_unresolved Root_unresolved 492 1.2499999999999996e-134   NTclustered gi|2515741548|gb|CP117271.1| 2209 g38716 i0 100 98.0476190476191 266 0 97 0 1 266 3941703 3941968 Mutant Methanosarcina mazei strain Mm Mut 208, complete genome blastn 26767 492 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina mazei
23230732 23230732 PRJNA1123309_P_NODE_46699_length_253_cov_1.700000_g46319_i0 PRJNA1123309 46699 253 1.7 4.301 Salinirarus marinus 3068310 Archaea Archaea 56.5 0.002   NTclustered gi|2563036160|gb|CP132292.1| 3068310 g46319 i0 96.97 0.130434782608696 33 1 13 0 180 212 930919 930887 Haloferacaceae archaeon XH8 chromosome, complete genome blastn 33 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Salinirarus Salinirarus marinus
27828346 27828346 PRJNA1123309_P_NODE_57304_length_247_cov_0.896552_g56924_i0 PRJNA1123309 57304 247 0.896552 2.21448344 Candidatus Methanophagales archaeon 2056316 Archaea Archaea 46.6 0.00168   NR MCD6210180.1 2056316 g56924 i0 46.8 2.89068825910931 47 25 57.1 0 32 172 53 99 MCD6210180.1 transposase [Candidatus Methanophagales archaeon] diamond 714 46.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Candidatus Methanophagales     Candidatus Methanophagales archaeon
27954621 27954621 PRJNA1123309_P_NODE_26725_length_312_cov_2.974895_g26345_i0 PRJNA1123309 26725 312 2.974895 9.2816724 Methanocella arvoryzae 1175445 Archaea Archaea 65.5 8.38e-10   NR WP_012035946.1 1175445 g26345 i0 68.1 0.451923076923077 47 15 45.2 0 303 163 35 81 WP_012035946.1 prephenate dehydrogenase/arogenate dehydrogenase family protein [Methanocella arvoryzae] diamond 141 65.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales Methanocellaceae Methanocella Methanocella arvoryzae
28996836 28996836 PRJNA1123309_P_NODE_52088_length_250_cov_0.881356_g51708_i0 PRJNA1123309 52088 250 0.881356 2.20339 Candidatus Methanogaster sp. ANME-2c ERB4 2759911 Archaea Archaea 93.2 4.19e-20   NR QNO45974.1 2759911 g51708 i0 71 2.232 62 18 74.4 0 65 250 1 62 QNO45974.1 hypothetical protein EBOGGPCF_00019 [Candidatus Methanogaster sp. ANME-2c ERB4] diamond 558 93.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanogasteraceae Candidatus Methanogaster Candidatus Methanogaster sp. ANME-2c ERB4
30702046 30702046 PRJNA1123309_P_NODE_13074_length_423_cov_1.297143_g12698_i0 PRJNA1123309 13074 423 1.297143 5.48691489 Candidatus Methanocrinis natronophilus 3033396 Archaea Archaea 48.9 0.00161   NR WP_316965640.1 3033396 g12698 i0 28.5 0.971631205673759 137 85 93.6 6 414 19 58 186 WP_316965640.1 PQQ-binding-like beta-propeller repeat protein [Candidatus Methanocrinis natronophilus] diamond 411 48.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanocrinis Candidatus Methanocrinis natronophilus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;