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contig_metadata

23 rows where bioproject = "PRJNA1122875", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 23 ✖

tax_phylum 1

  • Pisuviricota · 23 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1122875 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
277482 277482 PRJNA1122875_P_NODE_13761_length_449_cov_2.047872_g13537_i0 PRJNA1122875 13761 449 2.047872 9.19494528 Potyvirus telosmae 3240618 Viruses Viruses 830 0   NTclustered gi|2622038455|gb|OR786368.1| 400394 g13537 i0 100 99.5523385300668 449 0 100 0 1 449 1085 637 Telosma mosaic virus isolate TeMV-GX-FCG1 polyprotein gene, partial cds blastn 44699 830 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus telosmae
1552207 1552207 PRJNA1122875_P_NODE_2_length_5768_cov_5.357155_g1_i0 PRJNA1122875 2 5768 5.357155 309.0007004 Lentinula eaodes hypovirus 2 2992848 Viruses Viruses 4004 0   NTclustered gi|2324991072|gb|OK636212.1| 2992848 g1 i0 79.242 1.00225381414702 5781 1174 100 26 1 5768 8429 2662 Lentinula eaodes hypovirus 2 isolate LED2-8 RNA-dependent RNA polymerase (RdRp) gene, complete cds blastn 5781 4004 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Hypoviridae Hypovirus Lentinula eaodes hypovirus 2
1552471 1552471 PRJNA1122875_P_NODE_5162_length_691_cov_1.336570_g4953_i0 PRJNA1122875 5162 691 1.33657 9.2356987 Stralarivirus fragariae 3052753 Viruses Viruses 1253 0   NTclustered gi|2430128337|gb|OM311160.1| 28351 g4953 i0 99.421 6.28654124457308 691 3 100 1 1 691 2832 3521 Strawberry latent ringspot virus isolate SLRV/BJ, complete genome blastn 4344 1253 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Stralarivirus Stralarivirus fragariae
4104729 4104729 PRJNA1122875_P_NODE_33504_length_285_cov_1.028302_g33280_i0 PRJNA1122875 33504 285 1.028302 2.9306607 Stralarivirus fragariae 3052753 Viruses Viruses 520 6e-143   NTclustered gi|2430128337|gb|OM311160.1| 28351 g33280 i0 99.648 0.996491228070175 284 1 99 0 2 285 157 440 Strawberry latent ringspot virus isolate SLRV/BJ, complete genome blastn 284 520 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Stralarivirus Stralarivirus fragariae
4104875 4104875 PRJNA1122875_P_NODE_45444_length_249_cov_0.875000_g45220_i0 PRJNA1122875 45444 249 0.875 2.17875 Potyvirus citrulli 3240504 Viruses Viruses 416 6.939999999999999e-112   NTclustered gi|730091864|gb|KM597070.1| 146500 g45220 i0 96.787 99.9919678714859 249 8 100 0 1 249 9322 9570 Watermelon mosaic virus isolate RKG, complete genome blastn 24898 416 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus citrulli
6655367 6655367 PRJNA1122875_P_NODE_21606_length_357_cov_1.492958_g21382_i0 PRJNA1122875 21606 357 1.492958 5.32986006 Stralarivirus fragariae 3052753 Viruses Viruses 649 0   NTclustered gi|2430128337|gb|OM311160.1| 28351 g21382 i0 99.44 1 357 2 100 0 1 357 1611 1967 Strawberry latent ringspot virus isolate SLRV/BJ, complete genome blastn 357 649 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Stralarivirus Stralarivirus fragariae
9205666 9205666 PRJNA1122875_P_NODE_34728_length_281_cov_1.110577_g34504_i0 PRJNA1122875 34728 281 1.110577 3.12072137 Potyvirus sacchari 3240610 Viruses Viruses 514 2.75e-141   NTclustered gi|987898853|gb|KU171817.1| 12224 g34504 i0 99.644 100 281 1 100 0 1 281 9130 8850 Sugarcane mosaic virus isolate CN:HB:15, complete genome blastn 28100 514 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus sacchari
11232119 11232119 PRJNA1122875_P_NODE_44929_length_249_cov_1.750000_g44705_i0 PRJNA1122875 44929 249 1.75 4.3575 Viruses 10239 Viruses Viruses 451 1.9e-122   NTclustered gi|1836405768|gb|MN905961.1| 1955144 g44705 i0 99.595 48.136546184739 247 1 99 0 3 249 7903 7657 MAG: Dicistroviridae sp. isolate coa196dic1 genomic sequence, sequence blastn 11986 451 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
11756001 11756001 PRJNA1122875_P_NODE_18590_length_387_cov_1.452229_g18366_i0 PRJNA1122875 18590 387 1.452229 5.62012623 Potyvirus pennisseti 3240587 Viruses Viruses 496 1.42e-135   NTclustered gi|451037263|gb|JX070150.1| 221262 g18366 i0 90.052 33.5271317829457 382 38 99 0 5 386 8380 7999 Pennisetum mosaic virus isolate CD2, complete genome blastn 12975 496 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus pennisseti
13031291 13031291 PRJNA1122875_P_NODE_28951_length_305_cov_1.327586_g28727_i0 PRJNA1122875 28951 305 1.327586 4.0491373 Potyvirus sacchari 3240610 Viruses Viruses 542 1.38e-149   NTclustered gi|1173652586|gb|KU886553.1| 12224 g28727 i0 98.689 85.6426229508197 305 4 100 0 1 305 8844 8540 Sugarcane mosaic virus isolate Yunan, complete genome blastn 26121 542 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus sacchari
13031605 13031605 PRJNA1122875_P_NODE_6371_length_633_cov_1.708929_g6155_i0 PRJNA1122875 6371 633 1.708929 10.81752057 Potyvirus telosmae 3240618 Viruses Viruses 1144 0   NTclustered gi|2456538644|gb|ON932195.1| 400394 g6155 i0 99.522 59.3981042654028 628 3 99 0 1 628 9169 8542 Telosma mosaic virus isolate RJ, complete genome blastn 37599 1144 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus telosmae
15056354 15056354 PRJNA1122875_P_NODE_17632_length_397_cov_3.101852_g17408_i0 PRJNA1122875 17632 397 3.101852 12.31435244 Cripavirus 144051 Viruses Viruses 370 9.24e-98   NTclustered gi|2672713331|gb|OR723603.1| 1955141 g17408 i0 100 48.6977329974811 200 0 88 0 198 397 2783 2982 MAG: Cripavirus sp. isolate JLLYH22/43627 genomic sequence blastn 19333 370 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Cripavirus sp.
15580489 15580489 PRJNA1122875_P_NODE_30693_length_295_cov_1.040541_g30469_i0 PRJNA1122875 30693 295 1.040541 3.06959595 Lentinula edodes fusarivirus 2 2778977 Viruses Viruses 540 4.79e-149   NTclustered gi|1928162782|gb|MN744721.1| 2778977 g30469 i0 99.661 1.19661016949153 295 1 100 0 1 295 3799 3505 Lentinula edodes fusarivirus 2 isolate Le12Z84 RNA-dependent RNA polymerase gene, partial cds blastn 353 540 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Fusariviridae   Lentinula edodes fusarivirus 2
18129724 18129724 PRJNA1122875_P_NODE_8055_length_575_cov_1.486056_g7837_i0 PRJNA1122875 8055 575 1.486056 8.544822 Fushun polycipivirus 2 2905451 Viruses Viruses 1029 0   NTclustered gi|2169232387|gb|MZ210028.1| 2905451 g7837 i0 98.958 1.00173913043478 576 5 100 1 1 575 12006 11431 MAG: Fushun polycipivirus 2 isolate SBYYJFS21, complete genome blastn 576 1029 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Polycipiviridae   Fushun polycipivirus 2
20679070 20679070 PRJNA1122875_P_NODE_30837_length_294_cov_1.045249_g30613_i0 PRJNA1122875 30837 294 1.045249 3.07303206 Potyvirus citrulli 3240504 Viruses Viruses 510 3.74e-140   NTclustered gi|2777077809|gb|PP505905.1| 146500 g30613 i0 97.959 99.7891156462585 294 6 100 0 1 294 7970 8263 Watermelon mosaic virus isolate EM170143, complete genome blastn 29338 510 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus citrulli
24503363 24503363 PRJNA1122875_P_NODE_15380_length_426_cov_0.827195_g15156_i0 PRJNA1122875 15380 426 0.827195 3.5238507 Stralarivirus fragariae 3052753 Viruses Viruses 760 0   NTclustered gi|2430128337|gb|OM311160.1| 28351 g15156 i0 98.826 1 426 5 100 0 1 426 2193 2618 Strawberry latent ringspot virus isolate SLRV/BJ, complete genome blastn 426 760 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Stralarivirus Stralarivirus fragariae
24503413 24503413 PRJNA1122875_P_NODE_19280_length_380_cov_1.003257_g19056_i0 PRJNA1122875 19280 380 1.003257 3.8123766 Potyvirus sacchari 3240610 Viruses Viruses 691 0   NTclustered gi|987898853|gb|KU171817.1| 12224 g19056 i0 99.474 99.9657894736842 380 2 100 0 1 380 7108 7487 Sugarcane mosaic virus isolate CN:HB:15, complete genome blastn 37987 691 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus sacchari
27375791 27375791 PRJNA1122875_P_NODE_3_length_5644_cov_12.296536_g2_i0 PRJNA1122875 3 5644 12.296536 694.01649184 Orthornavirae 2732396 Viruses Viruses 105 2.6e-19   NR WAY16551.1 2809883 g2 i0 25.9 0.737243090007087 494 276 26.1 13 4012 5484 1 407 WAY16551.1 hypothetical protein [Stellavirales sp.] diamond 4161 105 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales     Stellavirales sp.
28428251 28428251 PRJNA1122875_P_NODE_35286_length_279_cov_1.150485_g35062_i0 PRJNA1122875 35286 279 1.150485 3.20985315 Iflaviridae-like virus 3 3077009 Viruses Viruses 119 7.07e-29   NR WPR18798.1 3077009 g35062 i0 60 1.93548387096774 90 36 96.8 0 3 272 2685 2774 WPR18798.1 MAG: RNA-dependent RNA polymerase [Iflaviridae-like virus 3] diamond 540 119 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae   Iflaviridae-like virus 3
28459907 28459907 PRJNA1122875_P_NODE_23206_length_346_cov_1.380952_g22982_i0 PRJNA1122875 23206 346 1.380952 4.77809392 Lentinula eaodes hypovirus 2 2992848 Viruses Viruses 201 3.37e-57   NR UZA97544.1 2992848 g22982 i0 90.4 0.988439306358382 114 11 98.8 0 3 344 743 856 UZA97544.1 RNA-dependent RNA polymerase [Lentinula eaodes hypovirus 2] diamond 342 201 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Hypoviridae Hypovirus Lentinula eaodes hypovirus 2
29501548 29501548 PRJNA1122875_P_NODE_2350_length_919_cov_1.825059_g2196_i0 PRJNA1122875 2350 919 1.825059 16.77229221 Lentinula eaodes hypovirus 2 2992848 Viruses Viruses 565 2.609999999999999e-181   NR UZA97544.1 2992848 g2196 i0 96.4 0.998911860718172 306 11 99.9 0 918 1 432 737 UZA97544.1 RNA-dependent RNA polymerase [Lentinula eaodes hypovirus 2] diamond 918 565 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Hypoviridae Hypovirus Lentinula eaodes hypovirus 2
32030085 32030085 PRJNA1122875_P_NODE_21938_length_354_cov_1.597865_g21714_i0 PRJNA1122875 21938 354 1.597865 5.6564421 Lentinula eaodes hypovirus 2 2992848 Viruses Viruses 164 2.3999999999999996e-44   NR UZA97544.1 2992848 g21714 i0 91.9 0.728813559322034 86 7 72.9 0 259 2 1 86 UZA97544.1 RNA-dependent RNA polymerase [Lentinula eaodes hypovirus 2] diamond 258 164 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Hypoviridae Hypovirus Lentinula eaodes hypovirus 2
32093280 32093280 PRJNA1122875_P_NODE_54678_length_227_cov_2.142857_g54454_i0 PRJNA1122875 54678 227 2.142857 4.86428539 Plasmopara viticola lesion associated Partitivirus 8 2692006 Viruses Viruses 61.2 9e-9   NR QHD64792.1 2692006 g54454 i0 47.2 0.700440528634361 53 28 70 0 160 2 271 323 QHD64792.1 RNA dependent RNA polymerase [Plasmopara viticola lesion associated Partitivirus 8] diamond 159 61.2 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Plasmopara viticola lesion associated Partitivirus 8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;