RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1122875", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1122875 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3579340 3579340 PRJNA1122875_P_NODE_29303_length_303_cov_1.004348_g29079_i0 PRJNA1122875 29303 303 1.004348 3.04317444 Orthorubulavirus 2560195 Viruses Viruses 560 3.79e-155   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g29079 i0 100 69.996699669967 303 0 100 0 1 303 1184 1486 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 21209 560 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
13782141 13782141 PRJNA1122875_P_NODE_6471_length_629_cov_1.330935_g6255_i0 PRJNA1122875 6471 629 1.330935 8.37158115 Orthorubulavirus 2560195 Viruses Viruses 1151 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g6255 i0 99.682 86.268680445151 629 2 100 0 1 629 3026 2398 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 54263 1157 0.994814174589456 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
32219894 32219894 PRJNA1122875_P_NODE_14118_length_444_cov_1.032345_g13894_i0 PRJNA1122875 14118 444 1.032345 4.5836118 Wuhan Fly Virus 1 1608101 Viruses Viruses 70.1 3.77e-11   NR YP_009304999.1 1608101 g13894 i0 32.3 2.55405405405405 130 80 82.4 3 3 368 31 160 YP_009304999.1 nucleocapsid protein [Wuhan Fly Virus 1] diamond 1134 70.1 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Hareavirales Phenuiviridae Phasivirus Phasivirus wuhanense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;