RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1122875" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1122875 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28617778 28617778 PRJNA1122875_P_NODE_4307_length_742_cov_2.391629_g4109_i0 PRJNA1122875 4307 742 2.391629 17.74588718 Minisyncoccota bacterium 2053589 Bacteria Bacteria 92.4 1.33e-17   NR MDD4409212.1 2053589 g4109 i0 32.7 1.19676549865229 171 112 68.7 2 530 21 222 390 MDD4409212.1 fibrinogen-like YCDxxxxGGGW domain-containing protein [Candidatus Paceibacterota bacterium] diamond 888 92.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32061628 32061628 PRJNA1122875_P_NODE_54658_length_227_cov_2.500000_g54434_i0 PRJNA1122875 54658 227 2.5 5.675 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.1 0.022   NR HUW87655.1 2053589 g54434 i0 32.8 0.885462555066079 67 44 87.2 1 28 225 90 156 HUW87655.1 NADH-quinone oxidoreductase subunit C [Candidatus Paceibacterota bacterium] diamond 201 43.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32156775 32156775 PRJNA1122875_P_NODE_9598_length_533_cov_0.993478_g9379_i0 PRJNA1122875 9598 533 0.993478 5.29523774 Minisyncoccota bacterium 2053589 Bacteria Bacteria 68.2 5.44e-10   NR MFA7315353.1 2053589 g9379 i0 47.6 2.40337711069418 82 37 42.8 1 15 242 210 291 MFA7315353.1 SPFH domain-containing protein [Candidatus Paceibacterota bacterium] diamond 1281 68.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32188294 32188294 PRJNA1122875_P_NODE_35718_length_277_cov_1.799020_g35494_i0 PRJNA1122875 35718 277 1.79902 4.9832854 Minisyncoccota bacterium 2053589 Bacteria Bacteria 72 3.55e-14   NR MDR3572201.1 2053589 g35494 i0 75.5 0.530685920577617 49 12 53.1 0 273 127 40 88 MDR3572201.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 147 72 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;