RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1122875" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1122875 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27259857 27259857 PRJNA1122875_P_NODE_30643_length_295_cov_1.432432_g30419_i0 PRJNA1122875 30643 295 1.432432 4.2256744 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 50.1 2.11e-5   NR MCS6771746.1 2212473 g30419 i0 50 1.06779661016949 36 18 36.6 0 294 187 61 96 MCS6771746.1 co-chaperone GroES [Kiritimatiellia bacterium] diamond 315 50.1 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
32725383 32725383 PRJNA1122875_P_NODE_43940_length_250_cov_1.740113_g43716_i0 PRJNA1122875 43940 250 1.740113 4.3502825 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 78.2 7.5e-15   NR HEY8241065.1 2212473 g43716 i0 51.4 3.264 70 34 84 0 228 19 200 269 HEY8241065.1 NAD(P)-dependent oxidoreductase [Kiritimatiellia bacterium] diamond 816 78.2 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;