RNAquarium Metadata Server
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contig_metadata

13 rows where bioproject = "PRJNA1122875" and tax_phylum = "Fornicata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Fornicata · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA1122875 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13031229 13031229 PRJNA1122875_P_NODE_2291_length_927_cov_2.632319_g2139_i0 PRJNA1122875 2291 927 2.632319 24.40159713 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 192 2.2299999999999998e-54   NR KAG9393620.1 201153 g2139 i0 59.1 0.585760517799353 181 64 58.3 2 3 542 231 402 KAG9393620.1 Aminomethyltransferase [Carpediemonas membranifera] diamond 543 192 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
15580822 15580822 PRJNA1122875_P_NODE_8933_length_551_cov_1.487448_g8714_i0 PRJNA1122875 8933 551 1.487448 8.19583848 Ergobibamus cyprinoides 926446 Fornicata other_Eukaryota 359 2.8499999999999996e-94   NTclustered gi|339759383|dbj|AB600304.1| 926446 g8714 i0 81.128 82.7604355716878 461 75 83 12 1 455 824 1278 Ergobibamus cyprinoides gene for translation elongation factor 1 alpha, complete cds, strain: CL blastn 45601 359 1 Eukaryota Metamonada   Fornicata       Ergobibamus Ergobibamus cyprinoides
26774659 26774659 PRJNA1122875_P_NODE_3261_length_824_cov_2.372836_g3078_i0 PRJNA1122875 3261 824 2.372836 19.55216864 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 66.6 2.79e-8   NR XP_067766868.1 348837 g3078 i0 39.3 0.746359223300971 107 56 37.1 5 23 328 428 530 XP_067766868.1 Cysteine-rich membrane protein 2 [Spironucleus salmonicida] diamond 615 66.6 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
27544164 27544164 PRJNA1122875_P_NODE_50264_length_244_cov_1.339181_g50040_i0 PRJNA1122875 50264 244 1.339181 3.26760164 Giardia intestinalis 5741 Fornicata other_Eukaryota 43.9 0.0149   NR ESU44771.1 5741 g50040 i0 32.4 2.54508196721311 68 41 83.6 2 207 4 407 469 ESU44771.1 Variant-specific surface protein [Giardia intestinalis] diamond 621 43.9 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
28017842 28017842 PRJNA1122875_P_NODE_45545_length_249_cov_0.875000_g45321_i0 PRJNA1122875 45545 249 0.875 2.17875 Kipferlia bialata 797122 Fornicata other_Eukaryota 57.8 1.88e-7   NR GIQ84238.1 797122 g45321 i0 56.8 0.530120481927711 44 17 50.6 1 248 123 325 368 GIQ84238.1 glycoside hydrolase, family 13 [Kipferlia bialata] diamond 132 57.8 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
28743886 28743886 PRJNA1122875_P_NODE_1547_length_1050_cov_1.919140_g1427_i0 PRJNA1122875 1547 1050 1.91914 20.15097 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 136 5.83e-33   NR KAG9391109.1 201153 g1427 i0 30.7 1.78285714285714 322 200 88.9 6 47 979 9 318 KAG9391109.1 MAC/Perforin domain [Carpediemonas membranifera] diamond 1872 136 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
29690750 29690750 PRJNA1122875_P_NODE_17290_length_402_cov_1.161094_g17066_i0 PRJNA1122875 17290 402 1.161094 4.66759788 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 87.4 1.88e-18   NR KAG9397400.1 201153 g17066 i0 39.4 0.985074626865672 132 76 97.8 3 398 6 25 153 KAG9397400.1 EF-hand domain pair [Carpediemonas membranifera] diamond 396 87.4 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
30701987 30701987 PRJNA1122875_P_NODE_21914_length_354_cov_2.192171_g21690_i0 PRJNA1122875 21914 354 2.192171 7.76028534 Hexamita inflata 28002 Fornicata other_Eukaryota 94 1.86e-21   NR CAK8788203.1 28002 g21690 i0 50 1.59322033898305 94 47 79.7 0 351 70 73 166 CAK8788203.1 HINF_045896 [Hexamita inflata] diamond 564 94 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
31681830 31681830 PRJNA1122875_P_NODE_50857_length_244_cov_0.900585_g50633_i0 PRJNA1122875 50857 244 0.900585 2.1974274 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 54.7 1.26e-7   NR GKT31054.1 2918883 g50633 i0 47.1 0.627049180327869 51 26 62.7 1 217 65 26 75 GKT31054.1 hypothetical protein ADUPG1_005738, partial [Aduncisulcus paluster] diamond 153 54.7 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
31734305 31734305 PRJNA1122875_P_NODE_6257_length_638_cov_1.826549_g6041_i0 PRJNA1122875 6257 638 1.826549 11.65338262 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 164 8.93e-46   NR KAG9391426.1 201153 g6041 i0 44.6 2.86363636363636 193 98 90.8 2 625 47 40 223 KAG9391426.1 Hydrogenosomal membrane protein 31-like [Carpediemonas membranifera] diamond 1827 164 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
31839996 31839996 PRJNA1122875_P_NODE_22297_length_351_cov_1.661871_g22073_i0 PRJNA1122875 22297 351 1.661871 5.83316721 Hexamita inflata 28002 Fornicata other_Eukaryota 52.4 3.77e-6   NR CAK8811890.1 28002 g22073 i0 47.1 0.905982905982906 51 26 42.7 1 350 201 11 61 CAK8811890.1 HINF_040402 [Hexamita inflata] diamond 318 52.4 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
32093225 32093225 PRJNA1122875_P_NODE_15498_length_424_cov_1.091168_g15274_i0 PRJNA1122875 15498 424 1.091168 4.62655232 Kipferlia bialata 797122 Fornicata other_Eukaryota 60.8 2.33e-8   NR GCA62031.1 797122 g15274 i0 35.7 0.813679245283019 115 60 76.4 4 96 419 53 160 GCA62031.1 hypothetical protein KIPB_000762 [Kipferlia bialata] diamond 345 60.8 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
32156733 32156733 PRJNA1122875_P_NODE_30758_length_294_cov_1.823529_g30534_i0 PRJNA1122875 30758 294 1.823529 5.3611752600000004 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 94.7 3.89e-20   NR KAG9392656.1 201153 g30534 i0 48.3 0.908163265306122 89 46 90.8 0 10 276 508 596 KAG9392656.1 ABC transporter transmembrane region 2 [Carpediemonas membranifera] diamond 267 94.7 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;