RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1122875" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1122875 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10481561 10481561 PRJNA1122875_P_NODE_54269_length_236_cov_2.834356_g54045_i0 PRJNA1122875 54269 236 2.834356 6.68908016 Fidelibacterota bacterium 2026760 Bacteria Bacteria 117 1.72e-28   NR NQV51146.1 2026760 g54045 i0 63.6 5.9364406779661 77 28 97.9 0 231 1 209 285 NQV51146.1 NAD-dependent malic enzyme [Fidelibacterota bacterium] diamond 1401 117 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30386512 30386512 PRJNA1122875_P_NODE_4053_length_760_cov_4.304221_g3857_i0 PRJNA1122875 4053 760 4.304221 32.7120796 Fidelibacterota bacterium 2026760 Bacteria Bacteria 304 2.48e-94   NR MBC8197595.1 2026760 g3857 i0 59.7 0.998684210526316 253 95 99.1 4 3 755 171 418 MBC8197595.1 trypsin-like peptidase domain-containing protein [Fidelibacterota bacterium] diamond 759 304 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31143993 31143993 PRJNA1122875_P_NODE_4835_length_709_cov_3.641509_g4630_i0 PRJNA1122875 4835 709 3.641509 25.81829881 Fidelibacterota bacterium 2026760 Bacteria Bacteria 87.8 8.89e-17   NR MBD23789.1 2026760 g4630 i0 30 0.858956276445698 203 117 83.8 5 3 596 73 255 MBD23789.1 proliferating cell nuclear antigen (pcna) [Fidelibacterota bacterium] diamond 609 87.8 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31365906 31365906 PRJNA1122875_P_NODE_27716_length_313_cov_1.370833_g27492_i0 PRJNA1122875 27716 313 1.370833 4.29070729 Fidelibacterota bacterium 2026760 Bacteria Bacteria 87 2.28e-17   NR MCK4716105.1 2026760 g27492 i0 50.6 1.70607028753994 89 37 78.6 2 300 55 379 467 MCK4716105.1 hypothetical protein [Fidelibacterota bacterium] diamond 534 87 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;