RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1122875", tax_phylum = "Candidatus Micrarchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Candidatus Micrarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1122875 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30923466 30923466 PRJNA1122875_P_NODE_4554_length_726_cov_2.343032_g4353_i0 PRJNA1122875 4554 726 2.343032 17.01041232 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 55.1 7.93e-6   NR NYZ74883.1 2250274 g4353 i0 34.6 0.442148760330579 107 57 44.2 4 378 58 13 106 NYZ74883.1 hypothetical protein [Candidatus Micrarchaeota archaeon] diamond 321 55.1 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
31650199 31650199 PRJNA1122875_P_NODE_46697_length_248_cov_0.880000_g46473_i0 PRJNA1122875 46697 248 0.88 2.1824 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 84.7 5.01e-17   NR NYZ73931.1 2250274 g46473 i0 66.7 2.75806451612903 57 19 69 0 8 178 359 415 NYZ73931.1 ATPase [Candidatus Micrarchaeota archaeon] diamond 684 84.7 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;