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contig_metadata

22 rows where bioproject = "PRJNA1122875" and tax_kingdom = "Thermotogati"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 22 ✖

bioproject 1

  • PRJNA1122875 · 22 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
277803 277803 PRJNA1122875_P_NODE_42241_length_253_cov_3.222222_g42017_i0 PRJNA1122875 42241 253 3.222222 8.15222166 Deinococcus radiomollis 468916 Bacteria Bacteria 52.8 0.023   NTclustered gi|2865409981|gb|CP129906.1| 468916 g42017 i0 100 0.110671936758893 28 0 11 0 114 141 2390560 2390533 Deinococcus radiomollis strain PO-04-20-132 chromosome, complete genome blastn 28 52.8 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiomollis
1552524 1552524 PRJNA1122875_P_NODE_5542_length_670_cov_2.232831_g5331_i0 PRJNA1122875 5542 670 2.232831 14.9599677 uncultured Deinococcus sp. 158789 Bacteria Bacteria 1072 0   NTclustered gi|389546733|gb|JQ401661.1| 158789 g5331 i0 95.529 106.646268656716 671 29 100 1 1 670 21 691 Uncultured Deinococcus sp. clone CNY_01829 16S ribosomal RNA gene, partial sequence blastn 71453 1072 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus uncultured Deinococcus sp.
2828188 2828188 PRJNA1122875_P_NODE_22043_length_353_cov_1.439286_g21819_i0 PRJNA1122875 22043 353 1.439286 5.08067958 Deinococcus xinjiangensis 457454 Bacteria Bacteria 99.4 2.4899999999999998e-23   NR WP_353542942.1 457454 g21819 i0 58.7 1.39376770538244 92 29 78.2 1 278 3 56 138 WP_353542942.1 hypothetical protein [Deinococcus xinjiangensis] diamond 492 99.4 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus xinjiangensis
4104757 4104757 PRJNA1122875_P_NODE_35824_length_277_cov_1.372549_g35600_i0 PRJNA1122875 35824 277 1.372549 3.80196073 Meiothermus taiwanensis 172827 Bacteria Bacteria 507 4.53e-139   NTclustered gi|1395894659|gb|CP021130.1| 1339250 g35600 i0 99.639 14.072202166065 277 1 100 0 1 277 244900 244624 Meiothermus taiwanensis WR-220 chromosome, complete genome blastn 3898 507 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus taiwanensis
7930726 7930726 PRJNA1122875_P_NODE_45547_length_249_cov_0.875000_g45323_i0 PRJNA1122875 45547 249 0.875 2.17875 Deinococcus sp. NW-56 2080419 Bacteria Bacteria 460 3.16e-125   NTclustered gi|1339790003|gb|CP026516.1| 2080419 g45323 i0 100 164.385542168675 249 0 100 0 1 249 543562 543314 Deinococcus sp. NW-56 chromosome, complete genome blastn 40932 460 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. NW-56
16331222 16331222 PRJNA1122875_P_NODE_45193_length_249_cov_0.875000_g44969_i0 PRJNA1122875 45193 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 72 1.46e-14   NR WP_290644586.1 1955248 g44969 i0 60.4 3.68674698795181 53 21 63.9 0 248 90 13 65 WP_290644586.1 cold-shock protein [Kosmotoga sp.] diamond 918 72 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Kosmotoga Kosmotoga sp.
16331266 16331266 PRJNA1122875_P_NODE_51793_length_243_cov_0.905882_g51569_i0 PRJNA1122875 51793 243 0.905882 2.20129326 FCB group 1783270 Bacteria Bacteria 100 1.41e-23   NR MDQ3458296.1 1913990 g51569 i0 55.6 3.97530864197531 81 36 100 0 243 1 129 209 MDQ3458296.1 tryptophan-rich sensory protein [Deinococcota bacterium] diamond 966 101 0.99009900990099 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium
20155179 20155179 PRJNA1122875_P_NODE_46036_length_248_cov_1.451429_g45812_i0 PRJNA1122875 46036 248 1.451429 3.59954392 Deinococcus 1298 Bacteria Bacteria 71.3 6.19e-8   NTclustered gi|324314064|gb|CP002536.1| 693977 g45812 i0 87.097 1.47177419354839 62 8 25 0 139 200 1213442 1213381 Deinococcus proteolyticus MRP, complete genome blastn 365 71.3 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus proteolyticus
20679044 20679044 PRJNA1122875_P_NODE_2817_length_867_cov_1.797229_g2649_i0 PRJNA1122875 2817 867 1.797229 15.58197543 Deinococcus actinosclerus 1768108 Bacteria Bacteria 1351 0   NTclustered gi|972944657|gb|CP013910.1| 1768108 g2649 i0 94.828 217.462514417532 870 38 100 6 1 867 3086463 3085598 Deinococcus actinosclerus strain BM2 chromosome, complete genome blastn 188540 1351 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus actinosclerus
24503686 24503686 PRJNA1122875_P_NODE_42500_length_252_cov_3.005587_g42276_i0 PRJNA1122875 42500 252 3.005587 7.57407924 Deinococcus sp. NW-56 2080419 Bacteria Bacteria 466 6.89e-127   NTclustered gi|1339790003|gb|CP026516.1| 2080419 g42276 i0 100 213.551587301587 252 0 100 0 1 252 544624 544875 Deinococcus sp. NW-56 chromosome, complete genome blastn 53815 466 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. NW-56
27027689 27027689 PRJNA1122875_P_NODE_40682_length_259_cov_2.693548_g40458_i0 PRJNA1122875 40682 259 2.693548 6.97628932 Bacteria 2 Bacteria Bacteria 43.5 0.00551   NR MEX2542640.1 2026798 g40458 i0 45 1.86486486486486 60 27 66 2 19 189 33 89 MEX2542640.1 stage V sporulation protein S [Trueperaceae bacterium] diamond 483 43.9 0.990888382687927 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
27070087 27070087 PRJNA1122875_P_NODE_25222_length_330_cov_2.097276_g24998_i0 PRJNA1122875 25222 330 2.097276 6.9210108 Trueperaceae bacterium 2026798 Bacteria Bacteria 70.5 1.2e-12   NR MDZ7705414.1 2026798 g24998 i0 46.4 0.881818181818182 97 51 88.2 1 296 6 54 149 MDZ7705414.1 universal stress protein [Trueperaceae bacterium] diamond 291 70.5 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
28480569 28480569 PRJNA1122875_P_NODE_35966_length_276_cov_2.251232_g35742_i0 PRJNA1122875 35966 276 2.251232 6.21340032 Bacteria 2 Bacteria Bacteria 112 1.64e-26   NR WP_274967493.1 177758 g35742 i0 57.8 5.78260869565217 90 38 97.8 0 272 3 315 404 WP_274967493.1 dipeptidase [Pseudothermotoga lettingae] diamond 1596 113 0.991150442477876 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae Pseudothermotoga Pseudothermotoga lettingae
28606767 28606767 PRJNA1122875_P_NODE_12227_length_476_cov_1.605459_g12004_i0 PRJNA1122875 12227 476 1.605459 7.64198484 root 1 Root_unresolved Root_unresolved 98.6 3.2899999999999996e-23   NR HOJ87808.1 2033661 g12004 i0 53.7 1.52521008403361 82 36 50.4 1 174 413 42 123 HOJ87808.1 glycine cleavage system protein GcvH [Pseudothermotoga sp.] diamond 726 98.6 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae Pseudothermotoga Pseudothermotoga sp.
28954402 28954402 PRJNA1122875_P_NODE_38528_length_267_cov_1.747423_g38304_i0 PRJNA1122875 38528 267 1.747423 4.66561941 Bacteria 2 Bacteria Bacteria 45.4 0.00574   NR MCD6105328.1 1968895 g38304 i0 29.3 4.37078651685393 99 59 98.9 2 4 267 519 617 MCD6105328.1 sodium-translocating pyrophosphatase [Thermosipho sp. (in: thermotogales)] diamond 1167 45.4 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Thermosipho Thermosipho sp. (in: thermotogales)
29312257 29312257 PRJNA1122875_P_NODE_33549_length_284_cov_2.601896_g33325_i0 PRJNA1122875 33549 284 2.601896 7.38938464 Thermus brockianus 56956 Bacteria Bacteria 66.2 3.31e-10   NR WP_071676922.1 56956 g33325 i0 39.1 0.971830985915493 92 32 97.2 1 5 280 667 734 WP_071676922.1 penicillin acylase family protein [Thermus brockianus] diamond 276 66.2 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus brockianus
29585291 29585291 PRJNA1122875_P_NODE_20510_length_368_cov_1.044068_g20286_i0 PRJNA1122875 20510 368 1.044068 3.84217024 Bacteria 2 Bacteria Bacteria 253 3.91e-77   NR 1TAQ_A 271 g20286 i0 100 3.97826086956522 122 0 99.5 0 3 368 76 197 1TAQ_A Chain A, TAQ DNA POLYMERASE [Thermus aquaticus] diamond 1464 253 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus
29722411 29722411 PRJNA1122875_P_NODE_47050_length_247_cov_1.729885_g46826_i0 PRJNA1122875 47050 247 1.729885 4.27281595 Meiothermus sp. 1955249 Bacteria Bacteria 43.9 0.0148   NR WP_337869854.1 1955249 g46826 i0 29.6 0.862348178137652 71 50 86.2 0 17 229 162 232 WP_337869854.1 baseplate J/gp47 family protein [Meiothermus sp.] diamond 213 43.9 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus sp.
29849091 29849091 PRJNA1122875_P_NODE_36091_length_276_cov_1.369458_g35867_i0 PRJNA1122875 36091 276 1.369458 3.77970408 Mesotoga sp. 2053577 Bacteria Bacteria 42.4 0.00809   NR HRR45445.1 2053577 g35867 i0 34 0.576086956521739 53 35 57.6 0 250 92 5 57 HRR45445.1 hypothetical protein [Mesotoga sp.] diamond 159 42.4 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Mesotoga Mesotoga sp.
31681829 31681829 PRJNA1122875_P_NODE_50617_length_244_cov_0.900585_g50393_i0 PRJNA1122875 50617 244 0.900585 2.1974274 Synergistaceae bacterium 2053624 Bacteria Bacteria 54.3 1.76e-6   NR MBQ7577767.1 2053624 g50393 i0 43.8 2.93852459016393 48 27 59 0 214 71 111 158 MBQ7577767.1 sel1 repeat family protein [Synergistaceae bacterium] diamond 717 54.3 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
32315131 32315131 PRJNA1122875_P_NODE_44319_length_250_cov_0.870056_g44095_i0 PRJNA1122875 44319 250 0.870056 2.17514 Deinococcus malanensis 1706855 Bacteria Bacteria 75.9 8.66e-14   NR WP_189009313.1 1706855 g44095 i0 47 7.932 83 39 99.6 1 250 2 349 426 WP_189009313.1 threonine ammonia-lyase, biosynthetic [Deinococcus malanensis] diamond 1983 75.9 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus malanensis
32399018 32399018 PRJNA1122875_P_NODE_44559_length_250_cov_0.870056_g44335_i0 PRJNA1122875 44559 250 0.870056 2.17514 FCB group 1783270 Bacteria Bacteria 125 1.2699999999999998e-31   NR WP_188961577.1 393059 g44335 i0 69.5 10.812 82 24 98.4 1 3 248 123 203 WP_188961577.1 malate synthase A [Deinococcus aquiradiocola] diamond 2703 125 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus aquiradiocola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;