RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1122875", tax_kingdom = "Thermoproteati" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 1 ✖

tax_kingdom 1

  • Thermoproteati · 1 ✖

bioproject 1

  • PRJNA1122875 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32788151 32788151 PRJNA1122875_P_NODE_22740_length_348_cov_1.556364_g22516_i0 PRJNA1122875 22740 348 1.556364 5.41614672 Thermoprotei archaeon 2250277 Archaea Archaea 76.6 1.6e-13   NR RLE92819.1 2250277 g22516 i0 72.7 0.379310344827586 44 12 37.9 0 2 133 660 703 RLE92819.1 MAG: hypothetical protein DRN04_09125 [Thermoprotei archaeon] diamond 132 76.6 1 Archaea   Thermoproteati Thermoproteota Thermoprotei       Thermoprotei archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;