RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1122875", tax_kingdom = "Fungi" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1122875 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27639007 27639007 PRJNA1122875_P_NODE_38104_length_269_cov_1.219388_g37880_i0 PRJNA1122875 38104 269 1.219388 3.28015372 Olpidium bornovanus 278681 Fungi Fungi 129 2.56e-34   NR KAG5458773.1 278681 g37880 i0 72.9 3.79182156133829 85 23 94.8 0 13 267 83 167 KAG5458773.1 MAG: FAD binding domain-containing protein, partial [Olpidium bornovanus] diamond 1020 129 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
28617781 28617781 PRJNA1122875_P_NODE_45147_length_249_cov_0.875000_g44923_i0 PRJNA1122875 45147 249 0.875 2.17875 Olpidium bornovanus 278681 Fungi Fungi 123 1.07e-30   NR BAL15351.1 278681 g44923 i0 65.1 2 83 29 100 0 1 249 173 255 BAL15351.1 translation elongation factor 2, partial [Olpidium bornovanus] diamond 498 123 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;