RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1122875" and tax_clade = "Nitrospinota/Tectimicrobiota group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA1122875 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28164859 28164859 PRJNA1122875_P_NODE_15865_length_419_cov_1.323699_g15641_i0 PRJNA1122875 15865 419 1.323699 5.54629881 Bacteria 2 Bacteria Bacteria 134 1.89e-35   NR RMF90551.1 2026769 g15641 i0 57.7 14.3341288782816 137 46 96.7 3 15 419 49 175 RMF90551.1 MAG: NADPH:quinone reductase [Nitrospinota bacterium] diamond 6006 134 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
28901607 28901607 PRJNA1122875_P_NODE_46608_length_248_cov_0.880000_g46384_i0 PRJNA1122875 46608 248 0.88 2.1824 Nitrospinota bacterium 2026769 Bacteria Bacteria 57.8 1.98e-7   NR MBI3601181.1 2026769 g46384 i0 49.3 1.72983870967742 71 27 85.9 2 248 36 288 349 MBI3601181.1 GAF domain-containing protein [Nitrospinota bacterium] diamond 429 57.8 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;