RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1122875", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA1122875 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26679304 26679304 PRJNA1122875_P_NODE_14861_length_433_cov_1.475000_g14637_i0 PRJNA1122875 14861 433 1.475 6.38675 Candidatus Hydrogenedens 1462415 Bacteria Bacteria 105 2.23e-26   NR MCX8065013.1 2030809 g14637 i0 63.4 1.71131639722864 82 29 56.1 1 334 92 5 86 MCX8065013.1 acyl-CoA-binding protein [Candidatus Hydrogenedentota bacterium] diamond 741 105 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
27132957 27132957 PRJNA1122875_P_NODE_34322_length_282_cov_1.473684_g34098_i0 PRJNA1122875 34322 282 1.473684 4.15578888 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 49.3 1.49e-4   NR MFC1736976.1 2030809 g34098 i0 61.1 2.04255319148936 36 12 38.3 1 282 175 98 131 MFC1736976.1 ankyrin repeat domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 576 49.3 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29406936 29406936 PRJNA1122875_P_NODE_54729_length_226_cov_2.013072_g54505_i0 PRJNA1122875 54729 226 2.013072 4.54954272 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 56.6 3.88e-8   NR MBI2425729.1 2030809 g54505 i0 44.8 0.889380530973451 67 37 88.9 0 221 21 48 114 MBI2425729.1 Hpt domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 201 56.6 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31587306 31587306 PRJNA1122875_P_NODE_25956_length_325_cov_1.222222_g25732_i0 PRJNA1122875 25956 325 1.222222 3.9722215 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 87 2.74e-17   NR HDP34529.1 2030809 g25732 i0 39.1 2.98153846153846 110 65 99.7 1 324 1 264 373 HDP34529.1 DUF3459 domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 969 87 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;