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contig_metadata

8 rows where bioproject = "PRJNA1122875", tax_clade = "CRuMs" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 8 ✖

tax_clade 1

  • CRuMs · 8 ✖

bioproject 1

  • PRJNA1122875 · 8 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4104830 4104830 PRJNA1122875_P_NODE_42304_length_253_cov_1.711111_g42080_i0 PRJNA1122875 42304 253 1.711111 4.32911083 Diphylleia rotans 190327 Root_unresolved Root_unresolved 468 1.92e-127   NTclustered gi|1016881912|ref|NC_029886.1| 190327 g42080 i0 100 78.1660079051383 253 0 100 0 1 253 21414 21666 Diphylleia rotans isolate NIES-3764 mitochondrion, complete genome blastn 19776 468 1 Eukaryota CRuMs         Collodictyonidae Diphylleia Diphylleia rotans
4105047 4105047 PRJNA1122875_P_NODE_8304_length_567_cov_12.904858_g8086_i0 PRJNA1122875 8304 567 12.904858 73.17054486 Diphylleia rotans 190327 Root_unresolved Root_unresolved 970 0   NTclustered gi|1200177731|gb|MF039365.1| 190327 g8086 i0 97.544 34.2910052910053 570 9 100 4 1 567 2835 3402 Diphylleia rotans isolate D_NIES3764 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 19443 970 1 Eukaryota CRuMs         Collodictyonidae Diphylleia Diphylleia rotans
9205430 9205430 PRJNA1122875_P_NODE_14128_length_443_cov_3.402703_g13904_i0 PRJNA1122875 14128 443 3.402703 15.07397429 Diphylleia rotans 190327 Root_unresolved Root_unresolved 819 0   NTclustered gi|1200177731|gb|MF039365.1| 190327 g13904 i0 100 63.510158013544 443 0 100 0 1 443 1770 1328 Diphylleia rotans isolate D_NIES3764 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 28135 819 1 Eukaryota CRuMs         Collodictyonidae Diphylleia Diphylleia rotans
10481284 10481284 PRJNA1122875_P_NODE_3249_length_825_cov_11.702128_g3066_i0 PRJNA1122875 3249 825 11.702128 96.542556 Diphylleia rotans 190327 Root_unresolved Root_unresolved 1507 0   NTclustered gi|1200177731|gb|MF039365.1| 190327 g3066 i0 99.636 29.8242424242424 825 3 100 0 1 825 5063 4239 Diphylleia rotans isolate D_NIES3764 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 24605 1507 1 Eukaryota CRuMs         Collodictyonidae Diphylleia Diphylleia rotans
13031263 13031263 PRJNA1122875_P_NODE_2631_length_885_cov_3.060345_g2469_i0 PRJNA1122875 2631 885 3.060345 27.08405325 Diphylleia rotans 190327 Root_unresolved Root_unresolved 1629 0   NTclustered gi|1016881912|ref|NC_029886.1| 190327 g2469 i0 99.887 54.6745762711864 885 1 100 0 1 885 16355 17239 Diphylleia rotans isolate NIES-3764 mitochondrion, complete genome blastn 48387 1629 1 Eukaryota CRuMs         Collodictyonidae Diphylleia Diphylleia rotans
15580408 15580408 PRJNA1122875_P_NODE_24353_length_337_cov_1.166667_g24129_i0 PRJNA1122875 24353 337 1.166667 3.93166779 Diphylleia rotans 190327 Root_unresolved Root_unresolved 617 2.4999999999999997e-172   NTclustered gi|1016881912|ref|NC_029886.1| 190327 g24129 i0 99.703 1.42433234421365 337 1 100 0 1 337 55497 55833 Diphylleia rotans isolate NIES-3764 mitochondrion, complete genome blastn 480 617 1 Eukaryota CRuMs         Collodictyonidae Diphylleia Diphylleia rotans
19403710 19403710 PRJNA1122875_P_NODE_48756_length_246_cov_0.890173_g48532_i0 PRJNA1122875 48756 246 0.890173 2.18982558 Diphylleia rotans 190327 Root_unresolved Root_unresolved 455 1.4500000000000002e-123   NTclustered gi|1016881912|ref|NC_029886.1| 190327 g48532 i0 100 2.54878048780488 246 0 100 0 1 246 29597 29352 Diphylleia rotans isolate NIES-3764 mitochondrion, complete genome blastn 627 455 1 Eukaryota CRuMs         Collodictyonidae Diphylleia Diphylleia rotans
24503634 24503634 PRJNA1122875_P_NODE_38180_length_269_cov_1.010204_g37956_i0 PRJNA1122875 38180 269 1.010204 2.71744876 Diphylleia rotans 190327 Root_unresolved Root_unresolved 497 2.63e-136   NTclustered gi|1016881912|ref|NC_029886.1| 190327 g37956 i0 100 71.1375464684015 269 0 100 0 1 269 17250 17518 Diphylleia rotans isolate NIES-3764 mitochondrion, complete genome blastn 19136 497 1 Eukaryota CRuMs         Collodictyonidae Diphylleia Diphylleia rotans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;