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contig_metadata

37 rows where bioproject = "PRJNA1120771" and tax_superkingdom = "Archaea"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Archaea · 37 ✖

bioproject 1

  • PRJNA1120771 · 37 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7929432 7929432 PRJNA1120771_S_NODE_12747_length_308_cov_7.162264_g12347_i0 PRJNA1120771 12747 308 7.162264 22.05977312 Halosegnis marinus 3034023 Archaea Archaea 78.7 4.74e-10   NTclustered gi|2463595543|gb|CP119802.1| 3034023 g12347 i0 91.379 13.6201298701299 58 3 19 2 232 287 1168907 1168964 Halosegnis marinus strain DT85 chromosome, complete genome blastn 4195 78.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halosegnis Halosegnis marinus
7929465 7929465 PRJNA1120771_S_NODE_18207_length_271_cov_1.385965_g17807_i0 PRJNA1120771 18207 271 1.385965 3.75596515 Methanobrevibacter acididurans 120963 Archaea Archaea 52.8 0.025   NTclustered gi|2871247231|gb|CP166991.1| 120963 g17807 i0 100 0.103321033210332 28 0 10 0 34 61 897606 897579 Methanobrevibacter acididurans strain DSM 15163 chromosome, complete genome blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter acididurans
16853858 16853858 PRJNA1120771_S_NODE_23474_length_245_cov_4.613861_g23074_i0 PRJNA1120771 23474 245 4.613861 11.30395945 archaeon 1906665 Archaea Archaea 138 4.39e-37   NR RYH27250.1 1906665 g23074 i0 81.5 0.991836734693878 81 15 99.2 0 3 245 311 391 RYH27250.1 MAG: thiolase family protein [archaeon] diamond 243 138 1 Archaea               archaeon
20154895 20154895 PRJNA1120771_S_NODE_10636_length_329_cov_2.006993_g10236_i0 PRJNA1120771 10636 329 2.006993 6.60300697 root 1 Root_unresolved Root_unresolved 54.7 0.009   NTclustered gi|966204314|emb|LN831302.1| 1407499 g10236 i0 96.97 0.276595744680851 33 0 10 1 55 86 636940 636972 Halobacterium hubeiense strain JI20-1 genome assembly, chromosome: I blastn 91 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium hubeiense
24502504 24502504 PRJNA1120771_S_NODE_16660_length_280_cov_2.198312_g16260_i0 PRJNA1120771 16660 280 2.198312 6.1552736 archaeon 1906665 Archaea Archaea 105 1.08e-26   NR RYY79682.1 1906665 g16260 i0 90.2 0.546428571428571 51 5 54.6 0 127 279 22 72 RYY79682.1 MAG: peroxiredoxin [archaeon] diamond 153 105 1 Archaea               archaeon
27132909 27132909 PRJNA1120771_S_NODE_20442_length_259_cov_1.740741_g20042_i0 PRJNA1120771 20442 259 1.740741 4.50851919 archaeon 1906665 Archaea Archaea 76.3 7.49e-16   NR RYH30642.1 1906665 g20042 i0 66.7 0.625482625482625 54 18 62.5 0 258 97 40 93 RYH30642.1 MAG: hypothetical protein EON65_04545 [archaeon] diamond 162 76.3 1 Archaea               archaeon
27132910 27132910 PRJNA1120771_S_NODE_25982_length_235_cov_3.171875_g25582_i0 PRJNA1120771 25982 235 3.171875 7.45390625 archaeon 1906665 Archaea Archaea 72.8 6.86e-15   NR RYG58550.1 1906665 g25582 i0 97.1 1.30212765957447 34 1 43.4 0 2 103 39 72 RYG58550.1 MAG: hypothetical protein EON64_21195 [archaeon] diamond 306 72.8 1 Archaea               archaeon
27354757 27354757 PRJNA1120771_S_NODE_34083_length_210_cov_3.125749_g33683_i0 PRJNA1120771 34083 210 3.125749 6.5640729 archaeon 1906665 Archaea Archaea 54.7 1.67e-7   NR RYY71239.1 1906665 g33683 i0 76.7 0.428571428571429 30 7 42.9 0 27 116 52 81 RYY71239.1 MAG: hypothetical protein EON63_21875 [archaeon] diamond 90 54.7 1 Archaea               archaeon
27702234 27702234 PRJNA1120771_S_NODE_31264_length_218_cov_1.491429_g30864_i0 PRJNA1120771 31264 218 1.491429 3.25131522 archaeon 1906665 Archaea Archaea 48.5 8.71e-5   NR RYG65132.1 1906665 g30864 i0 77.8 0.371559633027523 27 6 37.2 0 217 137 121 147 RYG65132.1 MAG: SAM-dependent methyltransferase, partial [archaeon] diamond 81 48.5 1 Archaea               archaeon
27828250 27828250 PRJNA1120771_S_NODE_36844_length_201_cov_2.506329_g36444_i0 PRJNA1120771 36844 201 2.506329 5.03772129 archaeon 1906665 Archaea Archaea 53.5 4.19e-7   NR RYY79679.1 1906665 g36444 i0 70.6 1.49253731343284 34 10 50.7 0 197 96 78 111 RYY79679.1 MAG: thioredoxin [archaeon] diamond 300 53.5 1 Archaea               archaeon
27859632 27859632 PRJNA1120771_S_NODE_20425_length_259_cov_2.013889_g20025_i0 PRJNA1120771 20425 259 2.013889 5.21597251 archaeon 1906665 Archaea Archaea 89 1.01e-20   NR RYH14966.1 1906665 g20025 i0 82.6 0.532818532818533 46 8 53.3 0 2 139 63 108 RYH14966.1 MAG: hypothetical protein EON65_32670 [archaeon] diamond 138 89 1 Archaea               archaeon
27922889 27922889 PRJNA1120771_S_NODE_19825_length_262_cov_1.534247_g19425_i0 PRJNA1120771 19825 262 1.534247 4.01972714 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 60.8 1.92e-8   NR MDP4012182.1 2910166 g19425 i0 53.1 0.561068702290076 49 22 56.1 1 248 102 664 711 MDP4012182.1 fused protease/ribonucleoside-triphosphate reductase [Candidatus Nanoarchaeia archaeon] diamond 147 60.8 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
28017796 28017796 PRJNA1120771_S_NODE_7065_length_380_cov_1.807122_g6665_i0 PRJNA1120771 7065 380 1.807122 6.8670636 archaeon 1906665 Archaea Archaea 85.5 3.39e-17   NR RYG66691.1 1906665 g6665 i0 51 0.757894736842105 96 45 75.8 2 2 289 177 270 RYG66691.1 MAG: hypothetical protein EON64_09195 [archaeon] diamond 288 85.5 1 Archaea               archaeon
28112279 28112279 PRJNA1120771_S_NODE_3405_length_498_cov_22.967033_g3017_i0 PRJNA1120771 3405 498 22.967033 114.37582434 archaeon 1906665 Archaea Archaea 208 5.119999999999999e-66   NR MDP2438463.1 1906665 g3017 i0 80.8 2.89156626506024 120 23 72.3 0 497 138 39 158 MDP2438463.1 MC/SLC25 family protein [archaeon] diamond 1440 208 1 Archaea               archaeon
28712377 28712377 PRJNA1120771_S_NODE_25567_length_237_cov_2.242268_g25167_i0 PRJNA1120771 25567 237 2.242268 5.31417516 archaeon 1906665 Archaea Archaea 62.8 2.9e-9   NR RYG69615.1 1906665 g25167 i0 77.1 0.443037974683544 35 8 44.3 0 237 133 361 395 RYG69615.1 MAG: hypothetical protein EON64_02265 [archaeon] diamond 105 62.8 1 Archaea               archaeon
28775337 28775337 PRJNA1120771_S_NODE_18167_length_271_cov_2.289474_g17767_i0 PRJNA1120771 18167 271 2.289474 6.20447454 archaeon 1906665 Archaea Archaea 72 1.48e-12   NR MDP2435689.1 1906665 g17767 i0 56.7 0.74169741697417 67 29 74.2 0 271 71 235 301 MDP2435689.1 SDR family oxidoreductase [archaeon] diamond 201 72 1 Archaea               archaeon
28965046 28965046 PRJNA1120771_S_NODE_16208_length_283_cov_1.445833_g15808_i0 PRJNA1120771 16208 283 1.445833 4.09170739 archaeon 1906665 Archaea Archaea 44.7 0.0112   NR RYG64928.1 1906665 g15808 i0 24.4 0.826855123674912 78 59 82.7 0 7 240 54 131 RYG64928.1 MAG: hypothetical protein EON64_12980 [archaeon] diamond 234 44.7 1 Archaea               archaeon
29028323 29028323 PRJNA1120771_S_NODE_33488_length_212_cov_1.029586_g33088_i0 PRJNA1120771 33488 212 1.029586 2.18272232 Methanolobus vulcani 38026 Archaea Archaea 46.2 7.72e-5   NR WP_268865996.1 38026 g33088 i0 70 0.424528301886792 30 9 42.5 0 6 95 3 32 WP_268865996.1 hypothetical protein [Methanolobus vulcani] diamond 90 46.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus vulcani
29312199 29312199 PRJNA1120771_S_NODE_15389_length_288_cov_2.130612_g14989_i0 PRJNA1120771 15389 288 2.130612 6.13616256 archaeon 1906665 Archaea Archaea 95.1 1.17e-21   NR RYH31155.1 1906665 g14989 i0 48.3 0.927083333333333 89 36 92.7 1 19 285 144 222 RYH31155.1 MAG: hypothetical protein EON65_03315 [archaeon] diamond 267 95.1 1 Archaea               archaeon
29501521 29501521 PRJNA1120771_S_NODE_24850_length_240_cov_1.512690_g24450_i0 PRJNA1120771 24850 240 1.51269 3.630456 archaeon 1906665 Archaea Archaea 84.7 6.98e-18   NR RYH05596.1 1906665 g24450 i0 57.4 0.85 68 29 85 0 1 204 113 180 RYH05596.1 MAG: hypothetical protein EON65_44255 [archaeon] diamond 204 84.7 1 Archaea               archaeon
29659103 29659103 PRJNA1120771_S_NODE_34630_length_209_cov_1.572289_g34230_i0 PRJNA1120771 34630 209 1.572289 3.28608401 Candidatus Altiarchaeales archaeon 2250256 Archaea Archaea 45.1 0.00355   NR MBD3389064.1 2250256 g34230 i0 40.4 0.818181818181818 57 31 77.5 1 39 200 277 333 MBD3389064.1 AI-2E family transporter [Candidatus Altiarchaeales archaeon] diamond 171 45.1 1 Archaea   Nanobdellati Candidatus Altarchaeota Candidatus Altiarchaeia Candidatus Altarchaeales     Candidatus Altiarchaeales archaeon
29754076 29754076 PRJNA1120771_S_NODE_18031_length_272_cov_1.139738_g17631_i0 PRJNA1120771 18031 272 1.139738 3.10008736 Candidatus Micrarchaeia archaeon 3018267 Archaea Archaea 122 1.37e-33   NR MFP3950429.1 3018267 g17631 i0 61.8 1.96323529411765 89 34 98.2 0 2 268 28 116 MFP3950429.1 peptide-methionine (R)-S-oxide reductase MsrB [Candidatus Micrarchaeia archaeon] diamond 534 122 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia       Candidatus Micrarchaeia archaeon
30038514 30038514 PRJNA1120771_S_NODE_15111_length_290_cov_2.113360_g14711_i0 PRJNA1120771 15111 290 2.11336 6.128744 archaeon 1906665 Archaea Archaea 57 2.06e-8   NR RYG97112.1 1906665 g14711 i0 71.9 0.662068965517241 32 9 33.1 0 1 96 37 68 RYG97112.1 MAG: hypothetical protein EON65_53365, partial [archaeon] diamond 192 57 1 Archaea               archaeon
30196301 30196301 PRJNA1120771_S_NODE_32652_length_214_cov_2.415205_g32252_i0 PRJNA1120771 32652 214 2.415205 5.1685387 archaeon 1906665 Archaea Archaea 64.3 6.1e-10   NR RYY82367.1 1906665 g32252 i0 40 0.841121495327103 60 36 84.1 0 194 15 641 700 RYY82367.1 MAG: hypothetical protein EON63_13485 [archaeon] diamond 180 64.3 1 Archaea               archaeon
30228012 30228012 PRJNA1120771_S_NODE_12112_length_314_cov_6.014760_g11712_i0 PRJNA1120771 12112 314 6.01476 18.8863464 archaeon 1906665 Archaea Archaea 45.1 0.00332   NR RYY73917.1 1906665 g11712 i0 100 0.449044585987261 20 0 19.1 0 68 127 91 110 RYY73917.1 MAG: 50S ribosomal protein P1 [archaeon] diamond 141 45.1 1 Archaea               archaeon
30323436 30323436 PRJNA1120771_S_NODE_33632_length_211_cov_4.142857_g33232_i0 PRJNA1120771 33632 211 4.142857 8.74142827 archaeon 1906665 Archaea Archaea 84.7 4.04e-17   NR MDP2435098.1 1906665 g33232 i0 70.5 0.867298578199052 61 18 86.7 0 211 29 786 846 MDP2435098.1 HAD-IC family P-type ATPase [archaeon] diamond 183 84.7 1 Archaea               archaeon
30386453 30386453 PRJNA1120771_S_NODE_12313_length_312_cov_3.598513_g11913_i0 PRJNA1120771 12313 312 3.598513 11.22736056 Methanorbis rubei 3028300 Archaea Archaea 49.7 2.36e-4   NR WP_338096890.1 3028300 g11913 i0 50 0.5 52 25 50 1 311 156 204 254 WP_338096890.1 protease inhibitor I42 family protein [Methanorbis rubei] diamond 156 49.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanorbis Methanorbis rubei
30386454 30386454 PRJNA1120771_S_NODE_14413_length_295_cov_1.690476_g14013_i0 PRJNA1120771 14413 295 1.690476 4.9869042 archaeon 1906665 Archaea Archaea 99.8 6.6200000000000005e-22   NR RYH14627.1 1906665 g14013 i0 52.2 0.935593220338983 92 42 91.5 2 9 278 1605 1696 RYH14627.1 MAG: hypothetical protein EON65_33295, partial [archaeon] diamond 276 99.8 1 Archaea               archaeon
30670343 30670343 PRJNA1120771_S_NODE_2253_length_590_cov_21.063985_g1909_i0 PRJNA1120771 2253 590 21.063985 124.2775115 archaeon 1906665 Archaea Archaea 209 1.18e-65   NR MDP2438463.1 1906665 g1909 i0 80.8 2.4406779661017 120 23 61 0 2 361 39 158 MDP2438463.1 MC/SLC25 family protein [archaeon] diamond 1440 209 1 Archaea               archaeon
30722749 30722749 PRJNA1120771_S_NODE_34254_length_210_cov_1.544910_g33854_i0 PRJNA1120771 34254 210 1.54491 3.244311 root 1 Root_unresolved Root_unresolved 84 1.7e-18   NR RYH30350.1 1906665 g33854 i0 72.3 1.37142857142857 47 13 67.1 0 199 59 111 157 RYH30350.1 MAG: hypothetical protein EON65_05480 [archaeon] diamond 288 84.3 0.99644128113879 Archaea               archaeon
30891733 30891733 PRJNA1120771_S_NODE_25994_length_235_cov_2.718750_g25594_i0 PRJNA1120771 25994 235 2.71875 6.3890625 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 44.7 0.00673   NR MDO8554187.1 2250274 g25594 i0 50 0.791489361702128 36 18 46 0 3 110 429 464 MDO8554187.1 ATP citrate lyase citrate-binding domain-containing protein [Candidatus Micrarchaeota archaeon] diamond 186 44.7 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
31049853 31049853 PRJNA1120771_S_NODE_13975_length_298_cov_1.364706_g13575_i0 PRJNA1120771 13975 298 1.364706 4.06682388 archaeon 1906665 Archaea Archaea 96.3 1.62e-21   NR MDP2435115.1 1906665 g13575 i0 57.4 0.946308724832215 94 40 94.6 0 294 13 182 275 MDP2435115.1 prohibitin family protein [archaeon] diamond 282 96.3 1 Archaea               archaeon
31397454 31397454 PRJNA1120771_S_NODE_15196_length_289_cov_4.792683_g14796_i0 PRJNA1120771 15196 289 4.792683 13.85085387 archaeon 1906665 Archaea Archaea 48.5 5.72e-4   NR RYY86917.1 1906665 g14796 i0 38.9 0.8719723183391 54 27 49.8 1 145 288 164 217 RYY86917.1 MAG: hypothetical protein EON63_04950 [archaeon] diamond 252 48.5 1 Archaea               archaeon
31418154 31418154 PRJNA1120771_S_NODE_5136_length_426_cov_5.571802_g4736_i0 PRJNA1120771 5136 426 5.571802 23.73587652 Archaea 2157 Archaea Archaea 105 3.85e-26   NR NDB29054.1 1906665 g4736 i0 48.6 1.50704225352113 107 55 75.4 0 2 322 16 122 NDB29054.1 pyridoxal-phosphate dependent enzyme [archaeon] diamond 642 105 1 Archaea               archaeon
31555711 31555711 PRJNA1120771_S_NODE_6196_length_397_cov_17.867232_g5796_i0 PRJNA1120771 6196 397 17.867232 70.93291104 archaeon 1906665 Archaea Archaea 75.9 1.97e-13   NR MDP2435546.1 1906665 g5796 i0 44.8 0.876574307304786 116 45 80.1 5 4 321 173 279 MDP2435546.1 30S ribosomal protein S2 [archaeon] diamond 348 75.9 1 Archaea               archaeon
31587277 31587277 PRJNA1120771_S_NODE_9476_length_342_cov_3.200669_g9076_i0 PRJNA1120771 9476 342 3.200669 10.94628798 archaeon 1906665 Archaea Archaea 53.1 2.55e-5   NR MDP2435621.1 1906665 g9076 i0 34.7 0.657894736842105 75 47 64 2 294 76 423 497 MDP2435621.1 hypothetical protein [archaeon] diamond 225 53.1 1 Archaea               archaeon
32473141 32473141 PRJNA1120771_S_NODE_34119_length_210_cov_2.604790_g33719_i0 PRJNA1120771 34119 210 2.60479 5.470059 archaeon 1906665 Archaea Archaea 46.6 8.63e-4   NR RYH29318.1 1906665 g33719 i0 60.9 0.657142857142857 46 15 61.4 1 172 44 187 232 RYH29318.1 MAG: hypothetical protein EON65_08905 [archaeon] diamond 138 46.6 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;