RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA1120771", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 12 ✖

tax_phylum 1

  • Pisuviricota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1120771 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4103758 4103758 PRJNA1120771_S_NODE_39364_length_190_cov_5.081633_g38964_i0 PRJNA1120771 39364 190 5.081633 9.6551027 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.005   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g38964 i0 100 0.3 29 0 15 0 162 190 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
6654419 6654419 PRJNA1120771_S_NODE_14386_length_295_cov_2.361111_g13986_i0 PRJNA1120771 14386 295 2.361111 6.96527745 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 206 1.99e-48   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g13986 i0 93.478 0.467796610169492 138 9 47 0 1 138 502 639 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 138 206 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
13030230 13030230 PRJNA1120771_S_NODE_12151_length_314_cov_1.830258_g11751_i0 PRJNA1120771 12151 314 1.830258 5.74701012 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 438 1.9299999999999998e-118   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g11751 i0 95.29 0.878980891719745 276 13 88 0 34 309 2100 2375 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 276 438 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
13781853 13781853 PRJNA1120771_S_NODE_38511_length_194_cov_1100.185430_g38111_i0 PRJNA1120771 38511 194 1100.18543 2134.3597342 Viruses 10239 Viruses Viruses 69.4 1.66e-7   NTclustered gi|2165836832|emb|OV197136.1| 2697049 g38111 i0 95.455 23.5773195876289 44 0 23 2 144 187 29907 29948 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4574 69.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
15579397 15579397 PRJNA1120771_S_NODE_10253_length_332_cov_19174.155709_g9853_i0 PRJNA1120771 10253 332 19174.155709 63658.19695388 Betacoronavirus pandemicum 3418604 Viruses Viruses 121 8.449999999999999e-23   NTclustered gi|2165836832|emb|OV197136.1| 2697049 g9853 i0 94.872 26.3734939759036 78 2 23 2 252 329 29912 29987 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8756 121 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
16853802 16853802 PRJNA1120771_S_NODE_17014_length_278_cov_1.480851_g16614_i0 PRJNA1120771 17014 278 1.480851 4.11676578 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 381 2.869999999999999e-101   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g16614 i0 91.367 1 278 24 100 0 1 278 5193 4916 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 278 381 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
16853861 16853861 PRJNA1120771_S_NODE_23574_length_245_cov_1.900990_g23174_i0 PRJNA1120771 23574 245 1.90099 4.6574255 Betacoronavirus pandemicum 3418604 Viruses Viruses 52.8 0.022   NTclustered gi|2565357930|emb|OY628901.1| 2697049 g23174 i0 100 0.114285714285714 28 0 11 0 218 245 9638 9665 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
16853920 16853920 PRJNA1120771_S_NODE_3334_length_502_cov_63.237473_g2946_i0 PRJNA1120771 3334 502 63.237473 317.45211446 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 693 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g2946 i0 91.886 0.98207171314741 493 40 98 0 10 502 7108 6616 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 493 693 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
16853969 16853969 PRJNA1120771_S_NODE_5754_length_408_cov_15.895890_g5354_i0 PRJNA1120771 5754 408 15.89589 64.8552312 Porcine bastrovirus 2588662 Viruses Viruses 56.5 0.003   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g5354 i0 100 0.142156862745098 30 0 7 0 1 30 13 42 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
19402424 19402424 PRJNA1120771_S_NODE_17996_length_272_cov_1.899563_g17596_i0 PRJNA1120771 17996 272 1.899563 5.16681136 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 110 6.06e-26   NR AVM87439.1 3063761 g17596 i0 60.4 1.00367647058824 91 33 97.1 1 272 9 457 547 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 273 110 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
28554577 28554577 PRJNA1120771_S_NODE_20607_length_258_cov_2.427907_g20207_i0 PRJNA1120771 20607 258 2.427907 6.26400006 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 94 4.34e-20   NR AVM87439.1 3063761 g20207 i0 53.7 0.953488372093023 82 38 95.3 0 247 2 928 1009 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 246 94 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
30733556 30733556 PRJNA1120771_S_NODE_25834_length_236_cov_1.803109_g25434_i0 PRJNA1120771 25834 236 1.803109 4.25533724 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 159 3.6099999999999996e-43   NR WKU61618.1 3063761 g25434 i0 98.7 0.991525423728814 78 1 99.2 0 236 3 1923 2000 WKU61618.1 polyprotein [Zebrafish picornavirus 2] diamond 234 159 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;