contig_metadata
20 rows where bioproject = "PRJNA1120771", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9956583 | 9956583 | PRJNA1120771_S_NODE_24348_length_242_cov_1.603015_g23948_i0 | PRJNA1120771 | 24348 | 242 | 1.603015 | 3.8792963 | Stigmatella | 40 | Bacteria | Bacteria | 375 | 1.14e-99 | NTclustered | gi|507148216|ref|NR_103023.1| | 41 | g23948 | i0 | 94.628 | 211.97520661157 | 242 | 13 | 100 | 0 | 1 | 242 | 81 | 322 | Stigmatella aurantiaca strain DW4/3-1 23S ribosomal RNA gene, complete sequence | blastn | 51298 | 375 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 11755106 | 11755106 | PRJNA1120771_S_NODE_17990_length_272_cov_2.034934_g17590_i0 | PRJNA1120771 | 17990 | 272 | 2.034934 | 5.53502048 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 78.2 | 1e-15 | NR | MCK6502336.1 | 2818507 | g17590 | i0 | 66 | 5.85661764705882 | 50 | 17 | 55.1 | 0 | 4 | 153 | 118 | 167 | MCK6502336.1 peptidylprolyl isomerase [Myxococcota bacterium] | diamond | 1593 | 78.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 15579561 | 15579561 | PRJNA1120771_S_NODE_34133_length_210_cov_2.586826_g33733_i0 | PRJNA1120771 | 34133 | 210 | 2.586826 | 5.4323346 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 52.8 | 0.018 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g33733 | i0 | 100 | 0.133333333333333 | 28 | 0 | 13 | 0 | 11 | 38 | 5442877 | 5442904 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 18128305 | 18128305 | PRJNA1120771_S_NODE_22115_length_251_cov_3.326923_g21715_i0 | PRJNA1120771 | 22115 | 251 | 3.326923 | 8.35057673 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 119 | 1.63e-29 | NR | MCB9570003.1 | 2026763 | g21715 | i0 | 73.5 | 4.02788844621514 | 83 | 19 | 99.2 | 1 | 250 | 2 | 347 | 426 | MCB9570003.1 adenosylhomocysteinase [Myxococcales bacterium] | diamond | 1011 | 119 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 27291419 | 27291419 | PRJNA1120771_S_NODE_31203_length_218_cov_2.245714_g30803_i0 | PRJNA1120771 | 31203 | 218 | 2.245714 | 4.89565652 | Myxococcus sp. | 1929279 | Bacteria | Bacteria | 75.1 | 5.56e-14 | NR | MBE2248907.1 | 1929279 | g30803 | i0 | 53.5 | 1.95412844036697 | 71 | 28 | 95 | 2 | 216 | 10 | 221 | 288 | MBE2248907.1 M14 family metallocarboxypeptidase [Myxococcus sp.] | diamond | 426 | 75.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus sp. | ||
| 27754577 | 27754577 | PRJNA1120771_S_NODE_19924_length_261_cov_3.793578_g19524_i0 | PRJNA1120771 | 19924 | 261 | 3.793578 | 9.90123858 | Bacteria | 2 | Bacteria | Bacteria | 46.6 | 0.00178 | NR | MDW8245882.1 | 2510337 | g19524 | i0 | 38.2 | 1.44827586206897 | 68 | 28 | 78.2 | 2 | 4 | 207 | 126 | 179 | MDW8245882.1 hypothetical protein [Sandaracinaceae bacterium] | diamond | 378 | 47 | 0.991489361702128 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinaceae bacterium | ||||
| 28049200 | 28049200 | PRJNA1120771_S_NODE_28005_length_228_cov_2.351351_g27605_i0 | PRJNA1120771 | 28005 | 228 | 2.351351 | 5.36108028 | Labilithrix sp. | 1971228 | Bacteria | Bacteria | 116 | 5.48e-29 | NR | HSO39330.1 | 1971228 | g27605 | i0 | 73.7 | 1 | 76 | 20 | 100 | 0 | 1 | 228 | 200 | 275 | HSO39330.1 ABC transporter permease [Labilithrix sp.] | diamond | 228 | 116 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix sp. | |||
| 28144165 | 28144165 | PRJNA1120771_S_NODE_6405_length_393_cov_2.891429_g6005_i0 | PRJNA1120771 | 6405 | 393 | 2.891429 | 11.36331597 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 45.1 | 0.0271 | NR | MBL8678567.1 | 2026763 | g6005 | i0 | 40 | 0.648854961832061 | 85 | 45 | 60.3 | 2 | 81 | 317 | 399 | 483 | MBL8678567.1 DUF853 family protein [Myxococcales bacterium] | diamond | 255 | 45.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 28270045 | 28270045 | PRJNA1120771_S_NODE_9866_length_337_cov_2.874150_g9466_i0 | PRJNA1120771 | 9866 | 337 | 2.87415 | 9.6858855 | Corallococcus sp. NCRR | 2996782 | Bacteria | Bacteria | 44.7 | 0.023 | NR | WP_269013013.1 | 2996782 | g9466 | i0 | 44.8 | 0.516320474777448 | 58 | 32 | 51.6 | 0 | 161 | 334 | 658 | 715 | WP_269013013.1 Hsp70 family protein [Corallococcus sp. NCRR] | diamond | 174 | 44.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus sp. NCRR | ||
| 28522965 | 28522965 | PRJNA1120771_S_NODE_29207_length_224_cov_3.093923_g28807_i0 | PRJNA1120771 | 29207 | 224 | 3.093923 | 6.93038752 | Sandaracinaceae bacterium | 2510337 | Bacteria | Bacteria | 43.5 | 0.0152 | NR | MBK8588858.1 | 2510337 | g28807 | i0 | 41.1 | 0.75 | 56 | 28 | 75 | 1 | 41 | 208 | 274 | 324 | MBK8588858.1 hypothetical protein [Sandaracinaceae bacterium] | diamond | 168 | 43.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinaceae bacterium | ||||
| 29469740 | 29469740 | PRJNA1120771_S_NODE_30250_length_221_cov_1.719101_g29850_i0 | PRJNA1120771 | 30250 | 221 | 1.719101 | 3.79921321 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 122 | 2.22e-34 | NR | TMA97294.1 | 2026735 | g29850 | i0 | 84.7 | 1.92760180995475 | 72 | 11 | 97.7 | 0 | 3 | 218 | 9 | 80 | TMA97294.1 MAG: peptidoglycan-binding protein [Deltaproteobacteria bacterium] | diamond | 426 | 122 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 29880743 | 29880743 | PRJNA1120771_S_NODE_25031_length_239_cov_3.071429_g24631_i0 | PRJNA1120771 | 25031 | 239 | 3.071429 | 7.34071531 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 42 | 0.0412 | NR | MBS2027623.1 | 2026735 | g24631 | i0 | 41.5 | 0.514644351464435 | 41 | 22 | 49 | 1 | 137 | 21 | 1 | 41 | MBS2027623.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 123 | 42 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30354948 | 30354948 | PRJNA1120771_S_NODE_16212_length_283_cov_1.341667_g15812_i0 | PRJNA1120771 | 16212 | 283 | 1.341667 | 3.79691761 | Nannocystis pusilla | 889268 | Bacteria | Bacteria | 43.5 | 0.0215 | NR | WP_224193151.1 | 889268 | g15812 | i0 | 33.8 | 0.816254416961131 | 77 | 41 | 81.6 | 2 | 19 | 249 | 71 | 137 | WP_224193151.1 hypothetical protein [Nannocystis pusilla] | diamond | 231 | 43.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis pusilla | |||
| 30438742 | 30438742 | PRJNA1120771_S_NODE_33253_length_212_cov_5.473373_g32853_i0 | PRJNA1120771 | 33253 | 212 | 5.473373 | 11.60355076 | Bacteria | 2 | Bacteria | Bacteria | 62.4 | 5.82e-10 | NR | HQP35242.1 | 2268199 | g32853 | i0 | 61 | 1.7688679245283 | 41 | 16 | 58 | 0 | 205 | 83 | 128 | 168 | HQP35242.1 peptidylprolyl isomerase [Polyangiaceae bacterium] | diamond | 375 | 62.8 | 0.993630573248408 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 30575376 | 30575376 | PRJNA1120771_S_NODE_16293_length_282_cov_3.523013_g15893_i0 | PRJNA1120771 | 16293 | 282 | 3.523013 | 9.93489666 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 81.6 | 1.72e-17 | NR | MBW1975642.1 | 2026735 | g15893 | i0 | 52.4 | 0.872340425531915 | 82 | 39 | 87.2 | 0 | 31 | 276 | 46 | 127 | MBW1975642.1 50S ribosomal protein L7/L12 [Deltaproteobacteria bacterium] | diamond | 246 | 81.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30859974 | 30859974 | PRJNA1120771_S_NODE_25634_length_237_cov_1.345361_g25234_i0 | PRJNA1120771 | 25634 | 237 | 1.345361 | 3.18850557 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 48.5 | 3.17e-4 | NR | MCB9640782.1 | 2026763 | g25234 | i0 | 48.9 | 0.569620253164557 | 45 | 23 | 57 | 0 | 2 | 136 | 1126 | 1170 | MCB9640782.1 DUF924 family protein [Myxococcales bacterium] | diamond | 135 | 48.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 31018030 | 31018030 | PRJNA1120771_S_NODE_20135_length_260_cov_4.608295_g19735_i0 | PRJNA1120771 | 20135 | 260 | 4.608295 | 11.981567 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 50.8 | 4.46e-5 | NR | HEY8145956.1 | 2212474 | g19735 | i0 | 38.2 | 1.77692307692308 | 76 | 44 | 84.2 | 1 | 260 | 42 | 150 | 225 | HEY8145956.1 type 1 glutamine amidotransferase [Kofleriaceae bacterium] | diamond | 462 | 50.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 31112537 | 31112537 | PRJNA1120771_S_NODE_14415_length_295_cov_1.571429_g14015_i0 | PRJNA1120771 | 14415 | 295 | 1.571429 | 4.63571555 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 43.5 | 0.0384 | NR | MBP1683886.1 | 2026735 | g14015 | i0 | 44.4 | 0.457627118644068 | 45 | 23 | 45.8 | 1 | 232 | 98 | 330 | 372 | MBP1683886.1 tetratricopeptide repeat protein [Deltaproteobacteria bacterium] | diamond | 135 | 43.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 31576432 | 31576432 | PRJNA1120771_S_NODE_9916_length_336_cov_12.569966_g9516_i0 | PRJNA1120771 | 9916 | 336 | 12.569966 | 42.23508576 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 84 | 1.65e-17 | NR | HVE86554.1 | 2026763 | g9516 | i0 | 47.8 | 10.3839285714286 | 90 | 44 | 80.4 | 2 | 335 | 66 | 97 | 183 | HVE86554.1 lipocalin family protein [Myxococcales bacterium] | diamond | 3489 | 84 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 32061555 | 32061555 | PRJNA1120771_S_NODE_27978_length_228_cov_2.881081_g27578_i0 | PRJNA1120771 | 27978 | 228 | 2.881081 | 6.56886468 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 43.1 | 0.0223 | NR | MCE9575740.1 | 2026735 | g27578 | i0 | 56.4 | 0.513157894736842 | 39 | 17 | 51.3 | 0 | 6 | 122 | 501 | 539 | MCE9575740.1 M4 family metallopeptidase [Deltaproteobacteria bacterium] | diamond | 117 | 43.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;