RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA1120771", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 5 ✖

tax_phylum 1

  • Kitrinoviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1120771 · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1551251 1551251 PRJNA1120771_S_NODE_35042_length_207_cov_9.987805_g34642_i0 PRJNA1120771 35042 207 9.987805 20.67475635 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.005   NTclustered gi|1995060321|gb|MN450069.1| 12164 g34642 i0 100 0.681159420289855 29 0 14 0 179 207 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
4103586 4103586 PRJNA1120771_S_NODE_1084_length_848_cov_3.351553_g847_i0 PRJNA1120771 1084 848 3.351553 28.42116944 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.024   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g847 i0 100 0.0341981132075472 29 0 3 0 820 848 34 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
10480180 10480180 PRJNA1120771_S_NODE_1609_length_687_cov_48.868012_g1309_i0 PRJNA1120771 1609 687 48.868012 335.72324244 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.019   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g1309 i0 100 0.042212518195050903 29 0 4 0 659 687 34 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
18128323 18128323 PRJNA1120771_S_NODE_24535_length_241_cov_2.323232_g24135_i0 PRJNA1120771 24535 241 2.323232 5.59898912 Jujube closterovirus 1 3043313 Viruses Viruses 56.5 0.002   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g24135 i0 100 0.240663900414938 30 0 12 0 1 30 6 35 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
27291413 27291413 PRJNA1120771_S_NODE_13703_length_300_cov_2.708171_g13303_i0 PRJNA1120771 13703 300 2.708171 8.124513 Andean potato mild mosaic virus 1296569 Viruses Viruses 43.5 0.0383   NR WBO25746.1 1296569 g13303 i0 38.9 0.54 54 33 54 0 256 95 526 579 WBO25746.1 putative movement protein [Andean potato mild mosaic virus] diamond 162 43.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae Tymovirus Tymovirus mosandigenum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;