RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1120771", tax_phylum = "Candidatus Altarchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 1 ✖

tax_phylum 1

  • Candidatus Altarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1120771 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29659103 29659103 PRJNA1120771_S_NODE_34630_length_209_cov_1.572289_g34230_i0 PRJNA1120771 34630 209 1.572289 3.28608401 Candidatus Altiarchaeales archaeon 2250256 Archaea Archaea 45.1 0.00355   NR MBD3389064.1 2250256 g34230 i0 40.4 0.818181818181818 57 31 77.5 1 39 200 277 333 MBD3389064.1 AI-2E family transporter [Candidatus Altiarchaeales archaeon] diamond 171 45.1 1 Archaea   Nanobdellati Candidatus Altarchaeota Candidatus Altiarchaeia Candidatus Altarchaeales     Candidatus Altiarchaeales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;