RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1120771" and tax_kingdom = "Thermotogati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA1120771 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23228951 23228951 PRJNA1120771_S_NODE_28599_length_226_cov_2.377049_g28199_i0 PRJNA1120771 28599 226 2.377049 5.37213074 Synergistaceae 649777 Bacteria Bacteria 86.3 7.34e-18   NR WP_303147715.1 889794 g28199 i0 66.7 2.38938053097345 60 20 79.6 0 1 180 301 360 WP_303147715.1 pyridoxal-phosphate-dependent aminotransferase family protein [uncultured Cloacibacillus sp.] diamond 540 86.3 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Cloacibacillus uncultured Cloacibacillus sp.
28649253 28649253 PRJNA1120771_S_NODE_24507_length_241_cov_3.075758_g24107_i0 PRJNA1120771 24507 241 3.075758 7.41257678 Trueperaceae bacterium 2026798 Bacteria Bacteria 44.7 0.00741   NR MBW6454828.1 2026798 g24107 i0 32.8 0.721991701244813 58 32 72.2 1 189 16 38 88 MBW6454828.1 Xaa-Pro peptidase family protein [Trueperaceae bacterium] diamond 174 44.7 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;