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contig_metadata

5 rows where bioproject = "PRJNA1120771" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 5 ✖

bioproject 1

  • PRJNA1120771 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7929432 7929432 PRJNA1120771_S_NODE_12747_length_308_cov_7.162264_g12347_i0 PRJNA1120771 12747 308 7.162264 22.05977312 Halosegnis marinus 3034023 Archaea Archaea 78.7 4.74e-10   NTclustered gi|2463595543|gb|CP119802.1| 3034023 g12347 i0 91.379 13.6201298701299 58 3 19 2 232 287 1168907 1168964 Halosegnis marinus strain DT85 chromosome, complete genome blastn 4195 78.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halosegnis Halosegnis marinus
7929465 7929465 PRJNA1120771_S_NODE_18207_length_271_cov_1.385965_g17807_i0 PRJNA1120771 18207 271 1.385965 3.75596515 Methanobrevibacter acididurans 120963 Archaea Archaea 52.8 0.025   NTclustered gi|2871247231|gb|CP166991.1| 120963 g17807 i0 100 0.103321033210332 28 0 10 0 34 61 897606 897579 Methanobrevibacter acididurans strain DSM 15163 chromosome, complete genome blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter acididurans
20154895 20154895 PRJNA1120771_S_NODE_10636_length_329_cov_2.006993_g10236_i0 PRJNA1120771 10636 329 2.006993 6.60300697 root 1 Root_unresolved Root_unresolved 54.7 0.009   NTclustered gi|966204314|emb|LN831302.1| 1407499 g10236 i0 96.97 0.276595744680851 33 0 10 1 55 86 636940 636972 Halobacterium hubeiense strain JI20-1 genome assembly, chromosome: I blastn 91 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium hubeiense
29028323 29028323 PRJNA1120771_S_NODE_33488_length_212_cov_1.029586_g33088_i0 PRJNA1120771 33488 212 1.029586 2.18272232 Methanolobus vulcani 38026 Archaea Archaea 46.2 7.72e-5   NR WP_268865996.1 38026 g33088 i0 70 0.424528301886792 30 9 42.5 0 6 95 3 32 WP_268865996.1 hypothetical protein [Methanolobus vulcani] diamond 90 46.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus vulcani
30386453 30386453 PRJNA1120771_S_NODE_12313_length_312_cov_3.598513_g11913_i0 PRJNA1120771 12313 312 3.598513 11.22736056 Methanorbis rubei 3028300 Archaea Archaea 49.7 2.36e-4   NR WP_338096890.1 3028300 g11913 i0 50 0.5 52 25 50 1 311 156 204 254 WP_338096890.1 protease inhibitor I42 family protein [Methanorbis rubei] diamond 156 49.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanorbis Methanorbis rubei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;