RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1120771", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1120771 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21430496 21430496 PRJNA1120771_S_NODE_18797_length_267_cov_3.803571_g18397_i0 PRJNA1120771 18797 267 3.803571 10.15553457 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 58.5 9.48e-8   NR TEB19254.1 2494336 g18397 i0 55.6 0.606741573033708 54 23 59.6 1 25 183 210 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 162 58.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
28428204 28428204 PRJNA1120771_S_NODE_18886_length_267_cov_1.397321_g18486_i0 PRJNA1120771 18886 267 1.397321 3.73084707 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 101 5.78e-25   NR TEB16757.1 2494336 g18486 i0 50 0.898876404494382 80 40 89.9 0 5 244 91 170 TEB16757.1 hypothetical protein C9890_0560, partial [Perkinsus sp. BL_2016] diamond 240 101 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
30280954 30280954 PRJNA1120771_S_NODE_25792_length_236_cov_2.704663_g25392_i0 PRJNA1120771 25792 236 2.704663 6.38300468 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 77.4 9.09e-15   NR KAF4751384.1 32597 g25392 i0 53.2 12.8516949152542 79 30 99.2 2 1 234 216 288 KAF4751384.1 Dehydrogenase reductase SDR member 4, partial [Perkinsus olseni] diamond 3033 77.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
30386458 30386458 PRJNA1120771_S_NODE_30633_length_220_cov_0.983051_g30233_i0 PRJNA1120771 30633 220 0.983051 2.1627122 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 50.1 7.2e-5   NR KAF4664441.1 32597 g30233 i0 55.9 1.47272727272727 34 15 46.4 0 217 116 460 493 KAF4664441.1 hypothetical protein FOL46_004243 [Perkinsus olseni] diamond 324 50.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;