contig_metadata
19 rows where bioproject = "PRJNA1120771" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5379720 | 5379720 | PRJNA1120771_S_NODE_17805_length_273_cov_2.095652_g17405_i0 | PRJNA1120771 | 17805 | 273 | 2.095652 | 5.72112996 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 427 | 3.5599999999999992e-115 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g17405 | i0 | 94.872 | 158.285714285714 | 273 | 14 | 100 | 0 | 1 | 273 | 1249737 | 1250009 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 43212 | 427 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 7406434 | 7406434 | PRJNA1120771_S_NODE_2926_length_530_cov_4.154004_g2549_i0 | PRJNA1120771 | 2926 | 530 | 4.154004 | 22.0162212 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 750 | 0 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g2549 | i0 | 93.01 | 176.754716981132 | 515 | 35 | 97 | 1 | 1 | 514 | 1249814 | 1250328 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 93680 | 750 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 13030352 | 13030352 | PRJNA1120771_S_NODE_3251_length_507_cov_7.635776_g2864_i0 | PRJNA1120771 | 3251 | 507 | 7.635776 | 38.71338432 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 699 | 0 | NTclustered | gi|1958061316|gb|CP064987.1| | 2052180 | g2864 | i0 | 91.552 | 180.447731755424 | 509 | 39 | 100 | 4 | 1 | 507 | 2190851 | 2190345 | Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome | blastn | 91487 | 699 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 18128278 | 18128278 | PRJNA1120771_S_NODE_16655_length_280_cov_2.341772_g16255_i0 | PRJNA1120771 | 16655 | 280 | 2.341772 | 6.5569616 | Rosistilla oblonga | 2527990 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|1712737282|gb|CP036318.1| | 2527990 | g16255 | i0 | 96.875 | 0.328571428571429 | 32 | 1 | 11 | 0 | 82 | 113 | 5614571 | 5614540 | Rosistilla oblonga strain Mal33 chromosome | blastn | 92 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Rosistilla | Rosistilla oblonga | |
| 24502648 | 24502648 | PRJNA1120771_S_NODE_4440_length_449_cov_8.305419_g4042_i0 | PRJNA1120771 | 4440 | 449 | 8.305419 | 37.29133131 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 551 | 3.5199999999999983e-152 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g4042 | i0 | 88.864 | 57.8129175946548 | 449 | 48 | 99 | 2 | 1 | 448 | 1867429 | 1867876 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 25958 | 551 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 26595036 | 26595036 | PRJNA1120771_S_NODE_27361_length_230_cov_3.256684_g26961_i0 | PRJNA1120771 | 27361 | 230 | 3.256684 | 7.4903732 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 104 | 5.63e-26 | NR | MDA0834088.1 | 2026780 | g26961 | i0 | 56.6 | 3.93913043478261 | 76 | 33 | 99.1 | 0 | 3 | 230 | 106 | 181 | MDA0834088.1 TIGR00730 family Rossman fold protein [Planctomycetota bacterium] | diamond | 906 | 104 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 27354754 | 27354754 | PRJNA1120771_S_NODE_27103_length_231_cov_1.845745_g26703_i0 | PRJNA1120771 | 27103 | 231 | 1.845745 | 4.26367095 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 70.1 | 2.25e-12 | NR | MBA3722841.1 | 2052176 | g26703 | i0 | 87.5 | 0.831168831168831 | 32 | 4 | 41.6 | 0 | 230 | 135 | 205 | 236 | MBA3722841.1 hypothetical protein [Parachlamydiaceae bacterium] | diamond | 192 | 70.1 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 28428207 | 28428207 | PRJNA1120771_S_NODE_31466_length_217_cov_4.000000_g31066_i0 | PRJNA1120771 | 31466 | 217 | 4 | 8.68 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 47.8 | 4.51e-4 | NR | MCA9253257.1 | 2052180 | g31066 | i0 | 56.4 | 2.15668202764977 | 39 | 17 | 53.9 | 0 | 216 | 100 | 410 | 448 | MCA9253257.1 tryptophanase [Phycisphaerales bacterium] | diamond | 468 | 47.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 28712378 | 28712378 | PRJNA1120771_S_NODE_34127_length_210_cov_2.604790_g33727_i0 | PRJNA1120771 | 34127 | 210 | 2.60479 | 5.470059 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 43.9 | 0.00953 | NR | MCC7013265.1 | 2026780 | g33727 | i0 | 38.3 | 0.671428571428571 | 47 | 24 | 60 | 1 | 41 | 166 | 753 | 799 | MCC7013265.1 HEAT repeat domain-containing protein [Planctomycetota bacterium] | diamond | 141 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29186108 | 29186108 | PRJNA1120771_S_NODE_21289_length_255_cov_1.372642_g20889_i0 | PRJNA1120771 | 21289 | 255 | 1.372642 | 3.5002371 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 52.8 | 1.25e-5 | NR | MEI6343602.1 | 2026799 | g20889 | i0 | 38.8 | 0.788235294117647 | 67 | 34 | 70.6 | 1 | 24 | 203 | 595 | 661 | MEI6343602.1 glycosyltransferase [Verrucomicrobiota bacterium] | diamond | 201 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29553844 | 29553844 | PRJNA1120771_S_NODE_20790_length_257_cov_3.093458_g20390_i0 | PRJNA1120771 | 20790 | 257 | 3.093458 | 7.95018706 | Bacteria | 2 | Bacteria | Bacteria | 55.8 | 2.99e-7 | NR | MBM3953160.1 | 2026780 | g20390 | i0 | 42.2 | 1.51750972762646 | 64 | 35 | 74.7 | 1 | 256 | 65 | 93 | 154 | MBM3953160.1 acyl-CoA thioesterase [Planctomycetota bacterium] | diamond | 390 | 55.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29659095 | 29659095 | PRJNA1120771_S_NODE_14110_length_297_cov_1.964567_g13710_i0 | PRJNA1120771 | 14110 | 297 | 1.964567 | 5.83476399 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 78.2 | 2.28e-14 | NR | MBV8532608.1 | 2026799 | g13710 | i0 | 47.6 | 3.42424242424242 | 82 | 40 | 82.8 | 2 | 293 | 48 | 380 | 458 | MBV8532608.1 UTP--glucose-1-phosphate uridylyltransferase [Verrucomicrobiota bacterium] | diamond | 1017 | 78.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30153848 | 30153848 | PRJNA1120771_S_NODE_10152_length_334_cov_2.089347_g9752_i0 | PRJNA1120771 | 10152 | 334 | 2.089347 | 6.97841898 | PVC group | 1783257 | Bacteria | Bacteria | 45.1 | 0.0126 | NR | MCE9581882.1 | 2026780 | g9752 | i0 | 34.4 | 1.36526946107784 | 93 | 53 | 83.5 | 3 | 326 | 48 | 154 | 238 | MCE9581882.1 hypothetical protein [Planctomycetota bacterium] | diamond | 456 | 45.4 | 0.993392070484582 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31302413 | 31302413 | PRJNA1120771_S_NODE_5775_length_408_cov_2.131507_g5375_i0 | PRJNA1120771 | 5775 | 408 | 2.131507 | 8.69654856 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 61.2 | 8.1e-8 | NR | MBI2948831.1 | 2026799 | g5375 | i0 | 38.2 | 0.654411764705882 | 89 | 55 | 65.4 | 0 | 1 | 267 | 664 | 752 | MBI2948831.1 choice-of-anchor D domain-containing protein [Verrucomicrobiota bacterium] | diamond | 267 | 61.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31618693 | 31618693 | PRJNA1120771_S_NODE_20676_length_258_cov_1.195349_g20276_i0 | PRJNA1120771 | 20676 | 258 | 1.195349 | 3.08400042 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 42.7 | 0.0431 | NR | MEP6662696.1 | 2026799 | g20276 | i0 | 65.2 | 0.267441860465116 | 23 | 8 | 26.7 | 0 | 90 | 158 | 191 | 213 | MEP6662696.1 amino acid permease [Verrucomicrobiota bacterium] | diamond | 69 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31797524 | 31797524 | PRJNA1120771_S_NODE_35997_length_204_cov_2.863354_g35597_i0 | PRJNA1120771 | 35997 | 204 | 2.863354 | 5.84124216 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 54.7 | 1.4e-6 | NR | OGV62924.1 | 1798578 | g35597 | i0 | 59.2 | 4.76470588235294 | 49 | 17 | 70.6 | 3 | 195 | 52 | 655 | 701 | OGV62924.1 MAG: hypothetical protein A2283_01740 [Lentisphaerae bacterium RIFOXYA12_FULL_48_11] | diamond | 972 | 55.1 | 0.992740471869329 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerae bacterium RIFOXYA12_FULL_48_11 | |||||
| 32398997 | 32398997 | PRJNA1120771_S_NODE_10139_length_334_cov_2.666667_g9739_i0 | PRJNA1120771 | 10139 | 334 | 2.666667 | 8.90666778 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 45.8 | 0.00848 | NR | MDZ4829327.1 | 2026778 | g9739 | i0 | 57.1 | 1.3562874251497 | 35 | 15 | 31.4 | 0 | 16 | 120 | 231 | 265 | MDZ4829327.1 S1/P1 nuclease [Phycisphaerae bacterium] | diamond | 453 | 46.2 | 0.991341991341991 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 32409737 | 32409737 | PRJNA1120771_S_NODE_31219_length_218_cov_1.988571_g30819_i0 | PRJNA1120771 | 31219 | 218 | 1.988571 | 4.33508478 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 44.7 | 0.00568 | NR | MBL0870027.1 | 2052180 | g30819 | i0 | 31.9 | 0.94954128440367 | 69 | 46 | 95 | 1 | 211 | 5 | 85 | 152 | MBL0870027.1 DUF2339 domain-containing protein [Phycisphaerales bacterium] | diamond | 207 | 44.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 32568089 | 32568089 | PRJNA1120771_S_NODE_7239_length_376_cov_4.180180_g6839_i0 | PRJNA1120771 | 7239 | 376 | 4.18018 | 15.7174768 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 128 | 3.3299999999999993e-34 | NR | MBY0307717.1 | 2052180 | g6839 | i0 | 76 | 1.42021276595745 | 75 | 18 | 59.8 | 0 | 13 | 237 | 154 | 228 | MBY0307717.1 S10 family peptidase [Phycisphaerales bacterium] | diamond | 534 | 128 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;