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contig_metadata

34 rows where bioproject = "PRJNA1120771", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 34 ✖

tax_clade 1

  • Discoba · 34 ✖

bioproject 1

  • PRJNA1120771 · 34 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1028550 1028550 PRJNA1120771_S_NODE_22161_length_251_cov_2.500000_g21761_i0 PRJNA1120771 22161 251 2.5 6.275 Naegleria 5761 Heterolobosea other_Eukaryota 464 2.47e-126   NTclustered gi|2618963742|gb|OR769034.1| 5762 g21761 i0 100 28.1155378486056 251 0 100 0 1 251 3874 3624 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 7057 464 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
2303847 2303847 PRJNA1120771_S_NODE_12442_length_311_cov_2.585821_g12042_i0 PRJNA1120771 12442 311 2.585821 8.04190331 Naegleria 5761 Heterolobosea other_Eukaryota 575 1.3899999999999995e-159   NTclustered gi|2618963742|gb|OR769034.1| 5762 g12042 i0 100 96.6205787781351 311 0 100 0 1 311 1630 1940 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 30049 575 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
4103621 4103621 PRJNA1120771_S_NODE_15684_length_286_cov_2.950617_g15284_i0 PRJNA1120771 15684 286 2.950617 8.43876462 Allovahlkampfia sp. PKD 2011a 1217110 Heterolobosea other_Eukaryota 529 1e-145   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g15284 i0 100 25.8986013986014 286 0 100 0 1 286 215 500 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 7407 529 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
5379793 5379793 PRJNA1120771_S_NODE_27725_length_229_cov_2.118280_g27325_i0 PRJNA1120771 27725 229 2.11828 4.8508612 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 357 3.87e-94   NTclustered gi|290972987|ref|XM_002669186.1| 5762 g27325 i0 94.76 5.27510917030568 229 12 100 0 1 229 1757 1985 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_56405), mRNA blastn 1208 357 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6131470 6131470 PRJNA1120771_S_NODE_9445_length_342_cov_9.662207_g9045_i0 PRJNA1120771 9445 342 9.662207 33.04474794 Naegleria 5761 Heterolobosea other_Eukaryota 627 4.22e-175   NTclustered gi|2618963742|gb|OR769034.1| 5762 g9045 i0 99.708 23.6111111111111 342 1 100 0 1 342 5438 5779 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 8075 627 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6654584 6654584 PRJNA1120771_S_NODE_6406_length_393_cov_2.185714_g6006_i0 PRJNA1120771 6406 393 2.185714 8.58985602 Naegleria pringsheimi 234921 Heterolobosea other_Eukaryota 662 0   NTclustered gi|2515557648|gb|OR045415.1| 234921 g6006 i0 98.153 36.5394402035623 379 7 96 0 1 379 5419 5797 Naegleria pringsheimi strain Singh(s) rDNA-containing extrachromosomal element genomic sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 14360 662 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria pringsheimi
9956591 9956591 PRJNA1120771_S_NODE_28888_length_225_cov_2.873626_g28488_i0 PRJNA1120771 28888 225 2.873626 6.4656585 Naegleria 5761 Heterolobosea other_Eukaryota 370 4.86e-98   NTclustered gi|2618963742|gb|OR769034.1| 5762 g28488 i0 100 88.8888888888889 200 0 89 0 26 225 264 463 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 20000 370 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13030278 13030278 PRJNA1120771_S_NODE_19451_length_264_cov_1.574661_g19051_i0 PRJNA1120771 19451 264 1.574661 4.15710504 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 88.6 3.66e-18   NR XP_002679892.1 5762 g19051 i0 53 0.943181818181818 83 32 93.2 2 262 17 1408 1484 XP_002679892.1 serine/threonine protein kinase [Naegleria gruberi] diamond 249 88.6 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14305465 14305465 PRJNA1120771_S_NODE_23832_length_244_cov_1.731343_g23432_i0 PRJNA1120771 23832 244 1.731343 4.22447692 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 396 8.829999999999997e-106   NTclustered gi|290974615|ref|XM_002669995.1| 5762 g23432 i0 95.902 4.18852459016393 244 10 100 0 1 244 1010 767 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_56383), mRNA blastn 1022 396 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14305569 14305569 PRJNA1120771_S_NODE_37152_length_200_cov_2.388535_g36752_i0 PRJNA1120771 37152 200 2.388535 4.77707 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 359 9.14e-95   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g36752 i0 99.005 14.585 201 1 100 1 1 200 3187 2987 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2917 359 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
16853778 16853778 PRJNA1120771_S_NODE_13934_length_298_cov_3.411765_g13534_i0 PRJNA1120771 13934 298 3.411765 10.1670597 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 534 2.26e-147   NTclustered gi|11466174|ref|NC_002573.1| 5762 g13534 i0 98.993 59.241610738255 298 3 100 0 1 298 898 1195 Naegleria gruberi mitochondrion, complete genome blastn 17654 534 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17606278 17606278 PRJNA1120771_S_NODE_4374_length_451_cov_5.867647_g3977_i0 PRJNA1120771 4374 451 5.867647 26.46308797 Naegleria 5761 Heterolobosea other_Eukaryota 809 0   NTclustered gi|32479131|gb|AY321362.1| 51634 g3977 i0 99.113 99.940133037694 451 2 100 1 1 451 803 1251 Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence blastn 45073 809 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
19402496 19402496 PRJNA1120771_S_NODE_27176_length_231_cov_0.925532_g26776_i0 PRJNA1120771 27176 231 0.925532 2.13797892 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 387 4.98e-103   NTclustered gi|290993545|ref|XM_002679348.1| 5762 g26776 i0 96.957 0.995670995670996 230 7 99 0 1 230 764 535 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_79118), partial mRNA blastn 230 387 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20677970 20677970 PRJNA1120771_S_NODE_10717_length_328_cov_2.540351_g10317_i0 PRJNA1120771 10717 328 2.540351 8.33235128 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 545 1.1599999999999999e-150   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g10317 i0 96.657 3.0030487804878 329 10 100 1 1 328 3988 3660 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 985 545 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
20678043 20678043 PRJNA1120771_S_NODE_20877_length_257_cov_1.219626_g20477_i0 PRJNA1120771 20877 257 1.219626 3.13443882 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 265 2.76e-66   NTclustered gi|290995447|ref|XM_002680261.1| 5762 g20477 i0 86.179 2.87937743190661 246 32 95 2 13 257 1075 831 Naegleria gruberi glutamate dehydrogenase (NAEGRDRAFT_78775), partial mRNA blastn 740 265 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23229051 23229051 PRJNA1120771_S_NODE_8419_length_357_cov_5.257962_g8019_i0 PRJNA1120771 8419 357 5.257962 18.77092434 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 643 4.379999999999998e-180   NTclustered gi|11466174|ref|NC_002573.1| 5762 g8019 i0 99.16 95.1344537815126 357 3 100 0 1 357 2319 2675 Naegleria gruberi mitochondrion, complete genome blastn 33963 643 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23980828 23980828 PRJNA1120771_S_NODE_32359_length_215_cov_1.674419_g31959_i0 PRJNA1120771 32359 215 1.674419 3.60000085 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 396 7.6e-106   NTclustered gi|2618963742|gb|OR769034.1| 5762 g31959 i0 100 79.6279069767442 214 0 99 0 2 215 3302 3089 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 17120 396 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
26837999 26837999 PRJNA1120771_S_NODE_29561_length_223_cov_2.416667_g29161_i0 PRJNA1120771 29561 223 2.416667 5.38916741 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.4 1.14e-5   NR XP_002678133.1 5762 g29161 i0 62.5 0.914798206278027 32 12 43 0 223 128 431 462 XP_002678133.1 disulfide isomerase family protein [Naegleria gruberi] diamond 204 52.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
26975135 26975135 PRJNA1120771_S_NODE_24522_length_241_cov_2.616162_g24122_i0 PRJNA1120771 24522 241 2.616162 6.30495042 Acrasis kona 1008807 Heterolobosea other_Eukaryota 67.4 7.34e-11   NR KAL0488817.1 1008807 g24122 i0 50.9 1.43153526970954 53 26 66 0 68 226 400 452 KAL0488817.1 25/26-hydroxycholesterol 7alpha-hydroxylase [Acrasis kona] diamond 345 67.4 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
27670536 27670536 PRJNA1120771_S_NODE_4104_length_461_cov_37.033493_g3709_i0 PRJNA1120771 4104 461 37.033493 170.72440273 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 207 1.26e-63   NR XP_044557880.1 5763 g3709 i0 86.8 0.741865509761388 114 15 74.2 0 460 119 203 316 XP_044557880.1 uncharacterized protein FDP41_008374 [Naegleria fowleri] diamond 342 207 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28259317 28259317 PRJNA1120771_S_NODE_11746_length_317_cov_15.540146_g11346_i0 PRJNA1120771 11746 317 15.540146 49.26226282 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 126 1.3499999999999999e-34   NR XP_044564077.1 5763 g11346 i0 71.8 3.23659305993691 85 24 80.4 0 5 259 66 150 XP_044564077.1 uncharacterized protein FDP41_001707 [Naegleria fowleri] diamond 1026 126 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28965051 28965051 PRJNA1120771_S_NODE_6088_length_400_cov_4.173669_g5688_i0 PRJNA1120771 6088 400 4.173669 16.694676 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 70.9 1.31e-11   NR XP_002674912.1 5762 g5688 i0 43 0.5925 79 40 55.5 1 397 176 190 268 XP_002674912.1 uncharacterized protein NAEGRDRAFT_70015 [Naegleria gruberi] diamond 237 70.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29143883 29143883 PRJNA1120771_S_NODE_28689_length_226_cov_1.420765_g28289_i0 PRJNA1120771 28689 226 1.420765 3.2109289 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 129 4.74e-35   NR XP_002680585.1 5762 g28289 i0 75.3 2.92035398230089 73 18 96.9 0 221 3 160 232 XP_002680585.1 uncharacterized protein NAEGRDRAFT_31260 [Naegleria gruberi] diamond 660 130 0.992307692307692 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29248935 29248935 PRJNA1120771_S_NODE_33869_length_211_cov_1.035714_g33469_i0 PRJNA1120771 33869 211 1.035714 2.18535654 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 59.7 2.62e-8   NR XP_044550565.1 51637 g33469 i0 43.8 1.03791469194313 73 38 99.5 2 210 1 1035 1107 XP_044550565.1 uncharacterized protein C9374_002317 [Naegleria lovaniensis] diamond 219 59.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
29680015 29680015 PRJNA1120771_S_NODE_19010_length_266_cov_2.730942_g18610_i0 PRJNA1120771 19010 266 2.730942 7.26430572 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 76.6 3.93e-14   NR XP_044566448.1 5763 g18610 i0 47 6.32706766917293 83 40 90.2 2 15 254 255 336 XP_044566448.1 uncharacterized protein FDP41_012392 [Naegleria fowleri] diamond 1683 76.6 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
29943868 29943868 PRJNA1120771_S_NODE_17951_length_272_cov_3.039301_g17551_i0 PRJNA1120771 17951 272 3.039301 8.26689872 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 49.3 1.32e-4   NR XP_044566043.1 5763 g17551 i0 42.6 0.595588235294118 54 31 59.6 0 107 268 107 160 XP_044566043.1 uncharacterized protein FDP41_012590 [Naegleria fowleri] diamond 162 49.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
30512391 30512391 PRJNA1120771_S_NODE_17313_length_276_cov_1.866953_g16913_i0 PRJNA1120771 17313 276 1.866953 5.15279028 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 97.8 6.51e-22   NR XP_002682998.1 5762 g16913 i0 59.7 0.782608695652174 72 28 77.2 1 276 64 277 348 XP_002682998.1 RNA polymerase II transcription factor TFIIH subunit [Naegleria gruberi] diamond 216 97.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30544070 30544070 PRJNA1120771_S_NODE_5773_length_408_cov_3.282192_g5373_i0 PRJNA1120771 5773 408 3.282192 13.39134336 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 68.9 1.57e-10   NR XP_002683316.1 5762 g5373 i0 32.3 1.86764705882353 130 87 94.9 1 407 21 219 348 XP_002683316.1 uncharacterized protein NAEGRDRAFT_61653 [Naegleria gruberi] diamond 762 68.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30859976 30859976 PRJNA1120771_S_NODE_32274_length_215_cov_2.418605_g31874_i0 PRJNA1120771 32274 215 2.418605 5.20000075 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 82.8 1.07e-16   NR XP_044551175.1 51637 g31874 i0 56.9 1.78604651162791 65 28 90.7 0 2 196 283 347 XP_044551175.1 uncharacterized protein C9374_001515 [Naegleria lovaniensis] diamond 384 82.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
30954999 30954999 PRJNA1120771_S_NODE_7074_length_379_cov_29.702381_g6674_i0 PRJNA1120771 7074 379 29.702381 112.57202399 Acrasis kona 1008807 Heterolobosea other_Eukaryota 109 1.89e-27   NR KAL0487640.1 1008807 g6674 i0 55.4 9.46701846965699 101 43 78.4 1 379 83 58 158 KAL0487640.1 ribosomal protein L21 [Acrasis kona] diamond 3588 109 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31018029 31018029 PRJNA1120771_S_NODE_18895_length_267_cov_1.165179_g18495_i0 PRJNA1120771 18895 267 1.165179 3.11102793 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 149 2.39e-39   NR XP_002679736.1 5762 g18495 i0 84.1 0.98876404494382 88 14 98.9 0 265 2 11 98 XP_002679736.1 uncharacterized protein NAEGRDRAFT_65043 [Naegleria gruberi] diamond 264 149 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31555705 31555705 PRJNA1120771_S_NODE_26276_length_234_cov_2.277487_g25876_i0 PRJNA1120771 26276 234 2.277487 5.32931958 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 61.2 9.88e-9   NR XP_002673817.1 5762 g25876 i0 48.7 1 78 37 98.7 2 233 3 664 739 XP_002673817.1 uncharacterized protein NAEGRDRAFT_71078 [Naegleria gruberi] diamond 234 61.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32125076 32125076 PRJNA1120771_S_NODE_33698_length_211_cov_2.589286_g33298_i0 PRJNA1120771 33698 211 2.589286 5.46339346 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 116 3e-28   NR XP_002681196.1 5762 g33298 i0 84.3 1.99052132701422 70 11 99.5 0 210 1 556 625 XP_002681196.1 HSP70 family protein [Naegleria gruberi] diamond 420 116 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32882587 32882587 PRJNA1120771_S_NODE_7780_length_367_cov_1.836420_g7380_i0 PRJNA1120771 7780 367 1.83642 6.7396614 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 105 1.73e-26   NR CAG4719120.1 5763 g7380 i0 49.5 0.776566757493188 95 46 76.8 2 3 284 23 116 CAG4719120.1 unnamed protein product [Naegleria fowleri] diamond 285 105 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;