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contig_metadata

17 rows where bioproject = "PRJNA1120586" and tax_superkingdom = "Archaea"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Archaea · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA1120586 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2303765 2303765 PRJNA1120586_P_NODE_41162_length_234_cov_0.872727_g40971_i0 PRJNA1120586 41162 234 0.872727 2.04218118 Halobacteriales 2235 Archaea Archaea 355 1.43e-93   NTclustered gi|1279136099|gb|CP024845.1| 1073996 g40971 i0 94.017 40.3418803418803 234 14 100 0 1 234 1938723 1938490 Halohasta litchfieldiae strain tADL chromosome, complete genome blastn 9440 355 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halohasta Halohasta litchfieldiae
4103245 4103245 PRJNA1120586_P_NODE_40844_length_234_cov_1.551515_g40653_i0 PRJNA1120586 40844 234 1.551515 3.6305451 Halopiger xanaduensis 387343 Archaea Archaea 322 1.45e-83   NTclustered gi|335336085|gb|CP002839.1| 797210 g40653 i0 91.453 48.4273504273504 234 20 100 0 1 234 527546 527779 Halopiger xanaduensis SH-6, complete genome blastn 11332 322 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halopiger Halopiger xanaduensis
8681616 8681616 PRJNA1120586_P_NODE_39807_length_235_cov_0.867470_g39616_i0 PRJNA1120586 39807 235 0.86747 2.0385545 Halobacteriales 2235 Archaea Archaea 390 3.93e-104   NTclustered gi|1657695474|gb|CP040331.1| 88724 g39616 i0 96.596 21.9659574468085 235 8 100 0 1 235 22708 22942 Natrinema versiforme strain BOL5-4 plasmid pNVE500 blastn 5162 390 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema versiforme
14305199 14305199 PRJNA1120586_P_NODE_48152_length_229_cov_0.900000_g47961_i0 PRJNA1120586 48152 229 0.9 2.061 Halorubrum sp. DM2 2527867 Archaea Archaea 128 3.3e-25   NTclustered gi|2474087799|emb|LR594487.1| 2527867 g47961 i0 77.928 9.20524017467249 222 37 92 9 19 229 100860 100640 Halorubrum sp. DM2 isolate Halorubrum diamantensis DM21 genome assembly, chromosome: 1 blastn 2108 128 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum sp. DM2
15579106 15579106 PRJNA1120586_P_NODE_44453_length_232_cov_0.883436_g44262_i0 PRJNA1120586 44453 232 0.883436 2.04957152 Nitrosotalea devaniterrae 1078905 Archaea Archaea 54.7 0.006   NTclustered gi|1003583480|emb|LN890280.1| 1078905 g44262 i0 100 0.125 29 0 13 0 107 135 61532 61504 Candidatus Nitrosotalea devanaterra genome assembly, chromosome: 1 blastn 29 54.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Nitrosotalea devaniterrae
18127541 18127541 PRJNA1120586_P_NODE_19315_length_303_cov_1.230769_g19124_i0 PRJNA1120586 19315 303 1.230769 3.72923007 Halorubrum sp. JWXQ-INN 858 2690782 Archaea Archaea 93.6 9.56e-20   NR WP_159487179.1 2690782 g19124 i0 62.2 0.97029702970297 98 37 97 0 294 1 193 290 WP_159487179.1 stage II sporulation protein M [Halorubrum sp. JWXQ-INN 858] diamond 294 93.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum sp. JWXQ-INN 858
21952552 21952552 PRJNA1120586_P_NODE_13518_length_342_cov_1.318681_g13327_i0 PRJNA1120586 13518 342 1.318681 4.50988902 archaeon 1906665 Archaea Archaea 223 4.649999999999999e-72   NR RYH25290.1 1906665 g13327 i0 95.6 1 114 5 100 0 1 342 61 174 RYH25290.1 MAG: 50S ribosomal protein L16 [archaeon] diamond 342 223 1 Archaea               archaeon
21953100 21953100 PRJNA1120586_P_NODE_46858_length_230_cov_0.894410_g46667_i0 PRJNA1120586 46858 230 0.89441 2.057143 Haloarcula marina 2961574 Archaea Archaea 91.6 4.35e-14   NTclustered gi|2269702775|gb|CP100404.1| 2961574 g46667 i0 92.188 2.15217391304348 64 5 28 0 167 230 1649096 1649159 Haloarcula marina strain DT1 chromosome, complete genome blastn 495 91.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula marina
26848755 26848755 PRJNA1120586_P_NODE_32041_length_255_cov_0.924731_g31850_i0 PRJNA1120586 32041 255 0.924731 2.35806405 Thermoplasmatota archaeon 2806419 Archaea Archaea 43.1 0.0308   NR MED6346029.1 2806419 g31850 i0 35.4 0.564705882352941 48 31 56.5 0 180 37 231 278 MED6346029.1 PQQ-binding-like beta-propeller repeat protein [Thermoplasmatota archaeon] diamond 144 43.1 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
28301784 28301784 PRJNA1120586_P_NODE_44946_length_231_cov_1.333333_g44755_i0 PRJNA1120586 44946 231 1.333333 3.07999923 archaeon 1906665 Archaea Archaea 70.9 2.44e-12   NR RYG65019.1 1906665 g44755 i0 43.4 0.987012987012987 76 43 98.7 0 230 3 168 243 RYG65019.1 MAG: hypothetical protein EON64_12790 [archaeon] diamond 228 70.9 1 Archaea               archaeon
29533231 29533231 PRJNA1120586_P_NODE_54990_length_206_cov_4.204380_g54799_i0 PRJNA1120586 54990 206 4.20438 8.6610228 archaeon 1906665 Archaea Archaea 77.4 1.36e-16   NR RYH00022.1 1906665 g54799 i0 60.3 0.844660194174757 58 23 84.5 0 31 204 14 71 RYH00022.1 MAG: hypothetical protein EON65_49750 [archaeon] diamond 174 77.4 1 Archaea               archaeon
29912314 29912314 PRJNA1120586_P_NODE_44451_length_232_cov_0.883436_g44260_i0 PRJNA1120586 44451 232 0.883436 2.04957152 Halobacteriales archaeon 1904752 Archaea Archaea 46.2 0.00161   NR MFP4590188.1 1904752 g44260 i0 62.5 1.25431034482759 32 12 41.4 0 1 96 200 231 MFP4590188.1 sugar phosphate nucleotidyltransferase [Halobacteriales archaeon] diamond 291 46.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon
31049846 31049846 PRJNA1120586_P_NODE_41295_length_234_cov_0.872727_g41104_i0 PRJNA1120586 41295 234 0.872727 2.04218118 archaeon 1906665 Archaea Archaea 86.7 2.97e-18   NR RYH11026.1 1906665 g41104 i0 54.7 0.961538461538462 75 34 96.2 0 9 233 98 172 RYH11026.1 MAG: hypothetical protein EON65_39105 [archaeon] diamond 225 86.7 1 Archaea               archaeon
31397452 31397452 PRJNA1120586_P_NODE_45076_length_231_cov_0.888889_g44885_i0 PRJNA1120586 45076 231 0.888889 2.05333359 archaeon 1906665 Archaea Archaea 97.4 1.5799999999999998e-23   NR RYG69081.1 1906665 g44885 i0 54.3 0.909090909090909 70 32 90.9 0 210 1 7 76 RYG69081.1 MAG: hypothetical protein EON64_03635, partial [archaeon] diamond 210 97.4 1 Archaea               archaeon
31839964 31839964 PRJNA1120586_P_NODE_33237_length_251_cov_1.824176_g33046_i0 PRJNA1120586 33237 251 1.824176 4.57868176 archaeon 1906665 Archaea Archaea 115 7.700000000000001e-28   NR RYH23131.1 1906665 g33046 i0 65.1 0.99203187250996006 83 29 99.2 0 1 249 352 434 RYH23131.1 MAG: hypothetical protein EON65_18260 [archaeon] diamond 249 115 1 Archaea               archaeon
32409734 32409734 PRJNA1120586_P_NODE_40239_length_235_cov_0.867470_g40048_i0 PRJNA1120586 40239 235 0.86747 2.0385545 archaeon 1906665 Archaea Archaea 60.1 2.58e-8   NR RYH13809.1 1906665 g40048 i0 43.2 0.94468085106383 74 40 94.5 2 229 8 55 126 RYH13809.1 MAG: VWA domain-containing protein [archaeon] diamond 222 60.1 1 Archaea               archaeon
32568077 32568077 PRJNA1120586_P_NODE_40119_length_235_cov_0.867470_g39928_i0 PRJNA1120586 40119 235 0.86747 2.0385545 Halolamina sp. 1940283 Archaea Archaea 131 1.56e-33   NR WP_332326263.1 1940283 g39928 i0 78.7 0.957446808510638 75 16 95.7 0 4 228 437 511 WP_332326263.1 S9 family peptidase [Halolamina sp.] diamond 225 131 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halolamina Halolamina sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;