RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1120586", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1120586 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28649246 28649246 PRJNA1120586_P_NODE_49887_length_228_cov_0.905660_g49696_i0 PRJNA1120586 49887 228 0.90566 2.0649048 Armatimonadota bacterium 2033014 Bacteria Bacteria 42.7 0.0313   NR MCJ7750156.1 2033014 g49696 i0 47.2 0.473684210526316 36 19 47.4 0 144 37 24 59 MCJ7750156.1 apolipoprotein N-acyltransferase [Armatimonadota bacterium] diamond 108 42.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31460793 31460793 PRJNA1120586_P_NODE_37456_length_240_cov_1.690058_g37265_i0 PRJNA1120586 37456 240 1.690058 4.0561392 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 43.1 0.0261   NR MFQ3586189.1 2682144 g37265 i0 30 1.25 50 35 62.5 0 63 212 422 471 MFQ3586189.1 alpha-amylase family glycosyl hydrolase [Fimbriimonadaceae bacterium] diamond 300 43.1 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;