contig_metadata
21 rows where bioproject = "PRJNA1120586" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 276150 | 276150 | PRJNA1120586_P_NODE_38041_length_239_cov_1.282353_g37850_i0 | PRJNA1120586 | 38041 | 239 | 1.282353 | 3.06482367 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 425 | 1.1e-114 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g37850 | i0 | 98.745 | 169.836820083682 | 239 | 3 | 100 | 0 | 1 | 239 | 582 | 820 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 40591 | 425 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 1028381 | 1028381 | PRJNA1120586_P_NODE_28441_length_265_cov_1.846939_g28250_i0 | PRJNA1120586 | 28441 | 265 | 1.846939 | 4.89438835 | Akkermansia | 239934 | Bacteria | Bacteria | 490 | 4.3299999999999986e-134 | NTclustered | gi|1888387165|gb|CP058562.1| | 239935 | g28250 | i0 | 100 | 296 | 265 | 0 | 100 | 0 | 1 | 265 | 139143 | 139407 | Akkermansia muciniphila strain AK32 chromosome, complete genome | blastn | 78440 | 490 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 1550308 | 1550308 | PRJNA1120586_P_NODE_14162_length_336_cov_2.883895_g13971_i0 | PRJNA1120586 | 14162 | 336 | 2.883895 | 9.6898872 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 337 | 7.81e-88 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g13971 | i0 | 84.956 | 248.738095238095 | 339 | 44 | 100 | 5 | 1 | 336 | 4211930 | 4212264 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 83576 | 337 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 1550469 | 1550469 | PRJNA1120586_P_NODE_24882_length_277_cov_3.346154_g24691_i0 | PRJNA1120586 | 24882 | 277 | 3.346154 | 9.26884658 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 348 | 2.9e-91 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g24691 | i0 | 89.455 | 125.72202166065 | 275 | 29 | 99 | 0 | 1 | 275 | 2019590 | 2019864 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 34825 | 348 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 1550828 | 1550828 | PRJNA1120586_P_NODE_44562_length_231_cov_5.567901_g44371_i0 | PRJNA1120586 | 44562 | 231 | 5.567901 | 12.86185131 | uncultured Gemmata sp. | 459262 | Bacteria | Bacteria | 394 | 2.98e-105 | NTclustered | gi|330376222|gb|JF731389.1| | 459262 | g44371 | i0 | 97.403 | 99.987012987013 | 231 | 6 | 100 | 0 | 1 | 231 | 432 | 202 | Uncultured Gemmata sp. clone BacTopLow012 16S ribosomal RNA gene, partial sequence | blastn | 23097 | 394 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | uncultured Gemmata sp. | |
| 4103449 | 4103449 | PRJNA1120586_P_NODE_51524_length_227_cov_0.911392_g51333_i0 | PRJNA1120586 | 51524 | 227 | 0.911392 | 2.06885984 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 164 | 6.72e-45 | NR | RLT10205.1 | 2026780 | g51333 | i0 | 94.7 | 0.991189427312775 | 75 | 4 | 99.1 | 0 | 3 | 227 | 307 | 381 | RLT10205.1 MAG: DUF1553 domain-containing protein [Planctomycetota bacterium] | diamond | 225 | 164 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 9204105 | 9204105 | PRJNA1120586_P_NODE_37928_length_239_cov_1.694118_g37737_i0 | PRJNA1120586 | 37928 | 239 | 1.694118 | 4.04894202 | uncultured Verrucomicrobiales bacterium | 100234 | Bacteria | Bacteria | 372 | 1.45e-98 | NTclustered | gi|220682330|gb|FJ542937.1| | 100234 | g37737 | i0 | 94.958 | 99.6610878661088 | 238 | 10 | 99 | 2 | 3 | 239 | 545 | 309 | Uncultured Verrucomicrobiales bacterium clone B01-06A 16S ribosomal RNA gene, partial sequence | blastn | 23819 | 372 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | uncultured Verrucomicrobiales bacterium | |||
| 15578891 | 15578891 | PRJNA1120586_P_NODE_33313_length_251_cov_1.560440_g33122_i0 | PRJNA1120586 | 33313 | 251 | 1.56044 | 3.9167044 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 67.8 | 9.42e-13 | NR | RYD71399.1 | 2026800 | g33122 | i0 | 53.4 | 0.872509960159363 | 73 | 34 | 87.3 | 0 | 219 | 1 | 6 | 78 | RYD71399.1 MAG: hypothetical protein EOP84_24950, partial [Verrucomicrobiaceae bacterium] | diamond | 219 | 67.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 18128219 | 18128219 | PRJNA1120586_P_NODE_8155_length_413_cov_2.223837_g7964_i0 | PRJNA1120586 | 8155 | 413 | 2.223837 | 9.18444681 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 675 | 0 | NTclustered | gi|2874253768|emb|OY969715.1| | 412056 | g7964 | i0 | 96.126 | 189.217917675545 | 413 | 16 | 100 | 0 | 1 | 413 | 915205 | 915617 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01916.bin.1.1 genome assembly, chromosome: 1 | blastn | 78147 | 675 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 21953030 | 21953030 | PRJNA1120586_P_NODE_43178_length_233_cov_0.878049_g42987_i0 | PRJNA1120586 | 43178 | 233 | 0.878049 | 2.04585417 | Planctomyces | 118 | Bacteria | Bacteria | 156 | 6.59e-43 | NR | MFN5899559.1 | 37635 | g42987 | i0 | 100 | 3.9656652360515 | 77 | 0 | 99.1 | 0 | 2 | 232 | 248 | 324 | MFN5899559.1 hypothetical protein [Planctomyces sp.] | diamond | 924 | 156 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomyces | Planctomyces sp. | |
| 22705390 | 22705390 | PRJNA1120586_P_NODE_50638_length_227_cov_1.069620_g50447_i0 | PRJNA1120586 | 50638 | 227 | 1.06962 | 2.4280374 | Bacteria | 2 | Bacteria | Bacteria | 196 | 8.829999999999999e-46 | NTclustered | gi|2874254043|emb|OY970367.1| | 120965 | g50447 | i0 | 82.667 | 291.396475770925 | 225 | 35 | 99 | 4 | 1 | 225 | 3454566 | 3454786 | MAG: uncultured Planctomycetota bacterium isolate MFD04580.bin.c.2 genome assembly, chromosome: 1 | blastn | 66147 | 196 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | uncultured Planctomycetota bacterium | |||||
| 23980679 | 23980679 | PRJNA1120586_P_NODE_3439_length_580_cov_2.802348_g3252_i0 | PRJNA1120586 | 3439 | 580 | 2.802348 | 16.2536184 | Limnoglobus | 2731450 | Bacteria | Bacteria | 695 | 0 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g3252 | i0 | 88.356 | 309.872413793103 | 584 | 61 | 100 | 6 | 1 | 580 | 2002294 | 2002874 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 179726 | 699 | 0.994277539341917 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 24502457 | 24502457 | PRJNA1120586_P_NODE_9740_length_386_cov_1.640379_g9549_i0 | PRJNA1120586 | 9740 | 386 | 1.640379 | 6.33186294 | Frigoriglobus tundricola | 2774151 | Bacteria | Bacteria | 532 | 1.08e-146 | NTclustered | gi|1870286614|gb|CP053452.2| | 2774151 | g9549 | i0 | 91.582 | 151.253886010363 | 392 | 23 | 99 | 5 | 1 | 383 | 4959452 | 4959842 | Frigoriglobus tundricola strain PL17 chromosome, complete genome | blastn | 58384 | 532 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Frigoriglobus | Frigoriglobus tundricola | |
| 26785450 | 26785450 | PRJNA1120586_P_NODE_44461_length_232_cov_0.883436_g44270_i0 | PRJNA1120586 | 44461 | 232 | 0.883436 | 2.04957152 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 78.6 | 3.22e-16 | NR | MFA5056513.1 | 2006848 | g44270 | i0 | 50 | 1.00862068965517 | 78 | 38 | 99.6 | 1 | 1 | 231 | 15 | 92 | MFA5056513.1 hypothetical protein [Opitutaceae bacterium] | diamond | 234 | 78.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 29280467 | 29280467 | PRJNA1120586_P_NODE_34109_length_249_cov_1.311111_g33918_i0 | PRJNA1120586 | 34109 | 249 | 1.311111 | 3.26466639 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 84.3 | 1.36e-18 | NR | MCH8147290.1 | 2026780 | g33918 | i0 | 100 | 0.506024096385542 | 42 | 0 | 50.6 | 0 | 3 | 128 | 100 | 141 | MCH8147290.1 aspartate 1-decarboxylase [Planctomycetota bacterium] | diamond | 126 | 84.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29690714 | 29690714 | PRJNA1120586_P_NODE_41870_length_234_cov_0.872727_g41679_i0 | PRJNA1120586 | 41870 | 234 | 0.872727 | 2.04218118 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 65.1 | 4.53e-10 | NR | MCE2861284.1 | 2006848 | g41679 | i0 | 93.9 | 1.26923076923077 | 33 | 2 | 42.3 | 0 | 1 | 99 | 731 | 763 | MCE2861284.1 oligopeptide transporter, OPT family [Opitutaceae bacterium] | diamond | 297 | 65.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 30007051 | 30007051 | PRJNA1120586_P_NODE_25171_length_276_cov_2.647343_g24980_i0 | PRJNA1120586 | 25171 | 276 | 2.647343 | 7.30666668 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 122 | 3.07e-32 | NR | MCH8147293.1 | 2026780 | g24980 | i0 | 100 | 0.619565217391304 | 57 | 0 | 62 | 0 | 276 | 106 | 186 | 242 | MCH8147293.1 hypothetical protein [Planctomycetota bacterium] | diamond | 171 | 122 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 30564543 | 30564543 | PRJNA1120586_P_NODE_15833_length_324_cov_1.101961_g15642_i0 | PRJNA1120586 | 15833 | 324 | 1.101961 | 3.57035364 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 206 | 2.99e-64 | NR | MBA4040115.1 | 37635 | g15642 | i0 | 100 | 2 | 108 | 0 | 100 | 0 | 324 | 1 | 97 | 204 | MBA4040115.1 glycosyltransferase [Planctomyces sp.] | diamond | 648 | 206 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomyces | Planctomyces sp. | |
| 31081244 | 31081244 | PRJNA1120586_P_NODE_23935_length_281_cov_2.193396_g23744_i0 | PRJNA1120586 | 23935 | 281 | 2.193396 | 6.16344276 | Planctomyces sp. | 37635 | Bacteria | Bacteria | 157 | 2.31e-45 | NR | MBA4040115.1 | 37635 | g23744 | i0 | 96.4 | 0.886120996441281 | 83 | 3 | 88.6 | 0 | 32 | 280 | 1 | 83 | MBA4040115.1 glycosyltransferase [Planctomyces sp.] | diamond | 249 | 157 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomyces | Planctomyces sp. | |
| 31460795 | 31460795 | PRJNA1120586_P_NODE_44076_length_232_cov_0.883436_g43885_i0 | PRJNA1120586 | 44076 | 232 | 0.883436 | 2.04957152 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 155 | 6.889999999999998e-42 | NR | MEY4688418.1 | 2026799 | g43885 | i0 | 97.4 | 1.99137931034483 | 77 | 2 | 99.6 | 0 | 231 | 1 | 580 | 656 | MEY4688418.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 462 | 155 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32568079 | 32568079 | PRJNA1120586_P_NODE_8659_length_404_cov_2.047761_g8468_i0 | PRJNA1120586 | 8659 | 404 | 2.047761 | 8.27295444 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 282 | 8.089999999999999e-90 | NR | MCH8147294.1 | 2026780 | g8468 | i0 | 100 | 0.995049504950495 | 134 | 0 | 99.5 | 0 | 403 | 2 | 257 | 390 | MCH8147294.1 non-ribosomal peptide synthetase [Planctomycetota bacterium] | diamond | 402 | 282 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;